Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1292 and SMa1294 overlap by 4 nucleotides SMa1294 and SMa1296 are separated by 495 nucleotides SMa1296 and SMa1297 are separated by 247 nucleotides
SMa1292: SMa1292 - Peptidase, at 704,981 to 705,916
SMa1292
SMa1294: SMa1294 - hypothetical protein, at 705,913 to 706,359
SMa1294
SMa1296: SMa1296 - alcohol dehydrogenase, at 706,855 to 707,877
SMa1296
SMa1297: SMa1297 - hypothetical protein, at 708,125 to 708,802
SMa1297
Position (kb) 706
707
708 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 706.357 kb on + strand at 706.357 kb on + strand at 706.373 kb on + strand at 706.373 kb on + strand at 706.373 kb on + strand at 706.374 kb on - strand at 706.692 kb on + strand at 706.692 kb on + strand at 706.693 kb on - strand at 706.696 kb on + strand at 706.696 kb on + strand at 706.696 kb on + strand at 706.697 kb on - strand at 706.716 kb on + strand at 706.716 kb on + strand at 706.717 kb on - strand at 706.759 kb on + strand at 706.759 kb on + strand at 706.759 kb on + strand at 706.789 kb on + strand at 706.807 kb on + strand at 706.879 kb on - strand at 707.037 kb on + strand, within SMa1296 at 707.106 kb on + strand, within SMa1296 at 707.106 kb on + strand, within SMa1296 at 707.107 kb on - strand, within SMa1296 at 707.129 kb on + strand, within SMa1296 at 707.284 kb on + strand, within SMa1296 at 707.284 kb on + strand, within SMa1296 at 707.284 kb on + strand at 707.285 kb on - strand, within SMa1296 at 707.324 kb on + strand, within SMa1296 at 707.401 kb on + strand, within SMa1296 at 707.411 kb on + strand, within SMa1296 at 707.411 kb on + strand, within SMa1296 at 707.412 kb on - strand, within SMa1296 at 707.497 kb on + strand, within SMa1296 at 707.497 kb on + strand, within SMa1296 at 707.504 kb on + strand, within SMa1296 at 707.505 kb on - strand, within SMa1296 at 707.505 kb on - strand, within SMa1296 at 707.675 kb on + strand, within SMa1296 at 707.676 kb on - strand, within SMa1296 at 707.777 kb on + strand at 707.778 kb on - strand at 707.778 kb on - strand at 707.963 kb on - strand at 708.145 kb on + strand at 708.215 kb on + strand, within SMa1297 at 708.375 kb on + strand, within SMa1297 at 708.375 kb on + strand, within SMa1297 at 708.376 kb on - strand, within SMa1297 at 708.699 kb on - strand, within SMa1297 at 708.774 kb on - strand at 708.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 706,357 + -1.4 706,357 + -0.5 706,373 + -0.0 706,373 + -0.6 706,373 + +0.2 706,374 - +0.0 706,692 + +0.5 706,692 + +0.6 706,693 - -0.5 706,696 + +0.1 706,696 + +0.6 706,696 + +0.5 706,697 - -0.2 706,716 + -1.0 706,716 + -1.1 706,717 - +0.6 706,759 + -0.2 706,759 + -0.6 706,759 + -1.6 706,789 + -1.0 706,807 + -0.1 706,879 - -1.1 707,037 + SMa1296 0.18 -1.4 707,106 + SMa1296 0.25 -0.6 707,106 + SMa1296 0.25 -0.2 707,107 - SMa1296 0.25 -1.3 707,129 + SMa1296 0.27 -1.2 707,284 + SMa1296 0.42 -0.5 707,284 + SMa1296 0.42 -0.5 707,284 + -0.0 707,285 - SMa1296 0.42 -0.7 707,324 + SMa1296 0.46 +0.3 707,401 + SMa1296 0.53 -0.9 707,411 + SMa1296 0.54 -0.7 707,411 + SMa1296 0.54 -2.8 707,412 - SMa1296 0.54 -0.6 707,497 + SMa1296 0.63 -0.2 707,497 + SMa1296 0.63 -0.8 707,504 + SMa1296 0.63 -1.2 707,505 - SMa1296 0.64 -0.5 707,505 - SMa1296 0.64 -2.0 707,675 + SMa1296 0.80 -0.9 707,676 - SMa1296 0.80 -1.2 707,777 + -1.4 707,778 - -0.2 707,778 - -0.1 707,963 - -0.9 708,145 + +0.0 708,215 + SMa1297 0.13 +0.7 708,375 + SMa1297 0.37 +0.5 708,375 + SMa1297 0.37 +0.2 708,376 - SMa1297 0.37 +0.0 708,699 - SMa1297 0.85 +0.5 708,774 - +0.4 708,774 - -1.3
Or see this region's nucleotide sequence