Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37400

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,867,588	-		RR42_RS37395	0.13	-0.9
3,867,588	-		RR42_RS37395	0.13	-0.6
3,867,609	-		RR42_RS37395	0.15	+0.3
3,867,609	-		RR42_RS37395	0.15	-0.9
3,867,609	-		RR42_RS37395	0.15	+0.4
3,867,701	+		RR42_RS37395	0.24	-0.4
3,868,000	-		RR42_RS37395	0.53	+0.4
3,868,349	+		RR42_RS37395	0.86	-0.1
3,868,349	+		RR42_RS37395	0.86	+0.9
3,868,350	-		RR42_RS37395	0.86	+0.1
3,868,350	-		RR42_RS37395	0.86	+0.1
3,868,393	-				+0.1
3,868,703	-		RR42_RS37400	0.30	-0.7
3,869,158	+				-1.5
3,869,158	+				+0.3
3,869,159	-				+0.2
3,869,159	-				-0.2
3,869,166	+				-0.9
3,869,166	+				-0.1
3,869,167	-				+0.3
3,869,167	-				-0.6
3,869,206	+				+0.0
3,869,206	+				+1.7
3,869,207	-				+0.2
3,869,207	-				+0.5
3,869,308	+				+0.7
3,869,308	+				-2.3
3,869,342	+				-0.3
3,869,342	+				+0.7
3,869,343	-				-1.5
3,869,343	-				-0.7
3,869,343	-				-0.6
3,869,343	-				-2.0
3,869,343	-				-2.3
3,869,517	-		RR42_RS37405	0.20	+0.5
3,869,543	-		RR42_RS37405	0.22	-0.6
3,869,695	+		RR42_RS37405	0.32	-0.5
3,869,696	-		RR42_RS37405	0.32	-0.0
3,869,696	-		RR42_RS37405	0.32	-0.5
3,869,794	+				+0.1
3,869,794	+		RR42_RS37405	0.39	-2.2
3,870,019	+		RR42_RS37405	0.55	+0.7
3,870,164	-		RR42_RS37405	0.65	-1.8