Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37205

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,809,772	+				-0.5
3,809,773	-				+0.1
3,809,796	+				+0.7
3,809,796	+				+0.3
3,809,796	+				+0.6
3,809,817	+				-0.3
3,809,818	-				-0.6
3,809,818	-				+0.4
3,809,847	+				-0.7
3,809,847	+				-0.9
3,809,848	-				-1.2
3,809,875	+				+0.3
3,810,017	+				+0.4
3,810,017	+				-0.2
3,810,017	+				-2.5
3,810,018	-				+1.3
3,810,050	+				+0.1
3,810,050	+				+0.3
3,810,050	+				+0.4
3,810,050	+				+0.9
3,810,051	-				-0.5
3,810,135	+				-0.1
3,810,136	-				-0.4
3,810,143	+				+0.4
3,810,143	+				+0.8
3,810,143	+				+0.8
3,810,143	+				+0.1
3,810,143	+				+0.9
3,810,143	+				+1.4
3,810,144	-				-0.5
3,810,144	-				-1.6
3,810,144	-				-0.7
3,810,144	-				+1.3
3,810,147	+				+1.1
3,810,147	+				+0.2
3,810,147	+				-0.0
3,810,148	-				+1.5
3,810,148	-				+0.1
3,810,148	-				+2.7
3,810,176	+				-0.5
3,810,176	+				-0.7
3,810,176	+				+0.9
3,810,177	-				+0.8
3,810,185	+				-1.0
3,810,186	-				+0.3
3,810,186	-				-1.2
3,810,186	-				+0.3
3,810,186	-				+0.1
3,810,195	+				-1.3
3,810,195	+				-1.2
3,810,204	-				+0.3
3,810,233	+				-0.6
3,810,233	+				-0.5
3,810,233	+				+0.5
3,810,234	-				+0.8
3,810,234	-				+1.0
3,810,234	-				+0.1
3,810,234	-				+0.1
3,810,234	-				+0.2
3,810,239	-				-0.5
3,810,262	+				+0.6
3,810,390	-				+1.3
3,810,390	-				+0.1
3,810,474	+				+0.7
3,810,474	+				-0.2
3,810,475	-				+0.4
3,810,478	+				+1.7
3,810,478	+				-0.1
3,810,478	+				-0.3
3,810,478	+				-0.6
3,810,478	+				+0.5
3,810,479	-				+0.8
3,810,479	-				+0.5
3,810,479	-				+0.2
3,810,479	-				+0.2
3,810,479	-				-0.3
3,810,479	-				+0.3
3,810,485	-				+0.5
3,810,485	-				+0.8
3,810,485	-				+0.1
3,810,493	-				+0.1
3,810,507	+				-0.4
3,810,508	-				-0.3
3,810,508	-				+0.8
3,810,588	+				+0.5
3,810,589	-				+0.5
3,810,594	-				-1.6
3,810,594	-				+0.1
3,810,620	-				+0.4
3,810,620	-				-0.5
3,810,632	+				-0.9
3,810,633	-				+0.1
3,810,633	-				-2.7
3,810,633	-				-0.9
3,810,702	+				-0.5
3,810,737	+				-0.4
3,810,829	+		RR42_RS37205	0.24	+0.0
3,810,830	-		RR42_RS37205	0.24	-1.0
3,810,830	-		RR42_RS37205	0.24	-0.1
3,810,830	-		RR42_RS37205	0.24	-1.1
3,810,844	+		RR42_RS37205	0.28	-0.9
3,810,860	+		RR42_RS37205	0.32	-1.4
3,810,861	-		RR42_RS37205	0.33	-0.1
3,810,861	-		RR42_RS37205	0.33	-0.1
3,810,862	+		RR42_RS37205	0.33	+0.9
3,810,862	+		RR42_RS37205	0.33	-0.1
3,810,863	-		RR42_RS37205	0.33	+0.3
3,810,863	-		RR42_RS37205	0.33	+0.1
3,810,863	-		RR42_RS37205	0.33	+1.1
3,810,863	-		RR42_RS37205	0.33	-0.8
3,810,863	-		RR42_RS37205	0.33	-1.0
3,810,863	-		RR42_RS37205	0.33	+0.3
3,810,899	-		RR42_RS37205	0.42	-0.5
3,810,899	-		RR42_RS37205	0.42	-1.0
3,811,013	-		RR42_RS37205	0.72	+0.5
3,811,099	+				-1.5
3,811,099	+				+0.7
3,811,272	+				-1.0
3,811,273	-				+0.5
3,811,347	-				+1.6
3,811,347	-				+0.5
3,811,386	-				+0.8
3,811,417	+				-0.7
3,811,417	+				-1.0
3,811,417	+				+0.7
3,811,461	+				-1.0
3,811,462	-				-0.0
3,811,492	+				-0.9
3,811,553	+				-0.6
3,811,553	+				-0.7
3,811,553	+				+0.1
3,811,554	-				-0.1
3,811,554	-				-0.4
3,811,554	-				+0.9
3,811,577	+				+0.1
3,811,577	+				-0.8
3,811,577	+				-1.9
3,811,578	-				-0.6
3,811,636	+				-0.6
3,811,637	-				-0.4
3,811,637	-				-1.7
3,811,693	+				-0.9
3,811,695	+				-0.1
3,811,695	+				+1.1
3,811,695	+				+0.5
3,811,695	+				-0.5
3,811,712	+				-0.9
3,811,745	+				+0.1
3,811,746	-				+0.2
3,811,781	+				-0.6
3,811,781	+				+0.5
3,811,781	+				+0.4
3,811,781	+				-1.9
3,811,781	+				+1.0
3,811,782	-				-0.0
3,811,782	-				-1.0
3,811,782	-				+0.2
3,811,782	-				+0.2
3,811,826	+				+0.2
3,811,826	+				+0.9
3,811,868	+				-0.1
3,811,868	+				-0.2
3,811,868	+				-1.2
3,812,008	+				+0.8
3,812,008	+				-0.3
3,812,025	+				+0.6
3,812,025	+				-0.6
3,812,026	-				+0.6
3,812,026	-				-0.1
3,812,026	-				+0.4
3,812,071	+				-0.3
3,812,079	+				+0.9