Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37135

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,793,636	-				+0.2
3,793,646	-				-0.9
3,793,686	+				+1.0
3,793,686	+				+0.1
3,793,686	+				-0.3
3,793,687	-				+0.1
3,793,783	+				-1.7
3,793,784	-				+0.4
3,793,784	-				+0.7
3,793,784	-				+0.6
3,793,784	-				-0.4
3,793,784	-				-0.2
3,793,976	-				-0.2
3,793,976	-				-0.3
3,793,994	+				+0.1
3,793,994	+				+0.1
3,793,994	+				-0.2
3,793,995	-				+0.2
3,793,995	-				-0.6
3,793,995	-				+0.0
3,794,273	+				-0.2
3,794,273	+				-0.3
3,794,273	+				+0.3
3,794,273	+				+0.2
3,794,274	-				-0.3
3,794,274	-				-0.2
3,794,274	-				+0.1
3,794,274	-				+1.1
3,794,274	-				+0.1
3,794,274	-				+0.5
3,794,274	-				-0.2
3,794,274	-				-0.0
3,794,275	+				+0.3
3,794,406	+				-1.4
3,794,406	+				-1.5
3,794,469	+				+0.0
3,794,508	+				-0.1
3,794,509	-				+0.5
3,794,526	+				+0.6
3,794,565	+				+1.3
3,794,565	+				-0.3
3,794,565	+				+0.7
3,794,724	-		RR42_RS37135	0.46	-0.2
3,794,746	-		RR42_RS37135	0.56	+1.3
3,794,832	+				-0.6
3,794,833	-				-0.1
3,794,833	-				+0.5
3,794,848	+				+0.2
3,794,848	+				-1.5
3,794,848	+				-0.7
3,794,848	+				+0.9
3,794,961	+				-1.2
3,795,035	+				-0.6
3,795,036	-				+0.3
3,795,064	-				+0.3
3,795,064	-				+0.7
3,795,067	-				+0.8
3,795,067	-				-1.3
3,795,067	-				+0.2
3,795,113	+				-1.0
3,795,114	-				+1.0
3,795,114	-				-0.1
3,795,114	-				+0.1
3,795,244	+				-0.1
3,795,244	+				-0.2
3,795,244	+				-0.7
3,795,269	-		RR42_RS37140	0.12	+0.9
3,795,269	-		RR42_RS37140	0.12	+0.9
3,795,269	-		RR42_RS37140	0.12	+0.4
3,795,269	-		RR42_RS37140	0.12	+0.2
3,795,270	+		RR42_RS37140	0.12	-0.4
3,795,270	+		RR42_RS37140	0.12	-0.2
3,795,270	+		RR42_RS37140	0.12	+0.1
3,795,271	-		RR42_RS37140	0.12	+0.0
3,795,271	-		RR42_RS37140	0.12	+0.2
3,795,271	-		RR42_RS37140	0.12	+0.7
3,795,333	+		RR42_RS37140	0.31	-0.3
3,795,333	+		RR42_RS37140	0.31	+1.5
3,795,333	+		RR42_RS37140	0.31	+0.6
3,795,333	+		RR42_RS37140	0.31	+0.1
3,795,333	+		RR42_RS37140	0.31	+0.3
3,795,334	-		RR42_RS37140	0.31	-0.2
3,795,334	-		RR42_RS37140	0.31	+0.5
3,795,334	-		RR42_RS37140	0.31	-0.9
3,795,334	-		RR42_RS37140	0.31	+0.0
3,795,334	-		RR42_RS37140	0.31	-0.4
3,795,410	+		RR42_RS37140	0.54	+0.1
3,795,410	+		RR42_RS37140	0.54	-1.2
3,795,411	-		RR42_RS37140	0.55	-1.1
3,795,411	-		RR42_RS37140	0.55	+1.2
3,795,436	+		RR42_RS37140	0.62	+0.7
3,795,437	-		RR42_RS37140	0.62	-0.3
3,795,442	+		RR42_RS37140	0.64	-1.5
3,795,442	+		RR42_RS37140	0.64	+0.2
3,795,443	-		RR42_RS37140	0.64	-0.6
3,795,443	-		RR42_RS37140	0.64	-0.2
3,795,443	-		RR42_RS37140	0.64	-0.6
3,795,456	+		RR42_RS37140	0.68	-0.9
3,795,457	-		RR42_RS37140	0.68	-0.4
3,795,457	-		RR42_RS37140	0.68	+0.1
3,795,457	-		RR42_RS37140	0.68	-0.8
3,795,457	-		RR42_RS37140	0.68	-1.2
3,795,500	+		RR42_RS37140	0.82	-0.2
3,795,501	-		RR42_RS37140	0.82	+0.3
3,795,558	+				-0.0
3,795,558	+				+1.9
3,795,558	+				+1.5
3,795,558	+				+0.5
3,795,559	-				+0.1
3,795,559	-				+0.4
3,795,623	+				+0.8
3,795,623	+				-1.4
3,795,623	+				+0.0
3,795,624	-				+0.1
3,795,624	-				+0.0
3,795,726	+				-0.3
3,795,727	-				+0.4
3,795,745	+				-1.5
3,795,766	+				-1.2
3,795,766	+				+0.5
3,795,767	-				-0.5
3,795,767	-				-2.7
3,795,767	-				-0.8
3,795,767	-				+0.8
3,795,767	-				-0.8
3,795,813	+				-0.7
3,795,813	+				+0.8
3,795,814	-				+0.1
3,795,814	-				-0.1