Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37110

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,788,246	+				+0.1
3,788,246	+				+0.1
3,788,341	+				+1.3
3,788,341	+				+0.1
3,788,342	-				-0.1
3,788,403	+				-0.5
3,788,453	-				-0.0
3,788,453	-				+0.9
3,788,500	+				-0.5
3,788,500	+				+0.2
3,788,500	+				-2.8
3,788,501	-				+1.1
3,788,549	+				+0.5
3,788,549	+				-0.6
3,788,549	+				+0.7
3,788,550	-				-0.1
3,788,632	-				+0.3
3,788,674	+				-0.1
3,788,737	+				+0.1
3,788,738	-				+0.7
3,788,738	-				-0.9
3,788,738	-				-0.6
3,788,738	-				-1.4
3,788,800	-				+0.8
3,788,800	-				+1.1
3,788,882	+		RR42_RS37105	0.19	+0.8
3,788,896	+		RR42_RS37105	0.24	+0.2
3,788,897	+		RR42_RS37105	0.25	-2.2
3,788,898	-		RR42_RS37105	0.25	+1.9
3,788,898	-		RR42_RS37105	0.25	+1.1
3,788,898	-		RR42_RS37105	0.25	+0.5
3,788,900	+		RR42_RS37105	0.26	+1.1
3,788,901	-		RR42_RS37105	0.26	-2.0
3,788,901	-		RR42_RS37105	0.26	+0.1
3,788,901	-		RR42_RS37105	0.26	+0.6
3,788,901	-		RR42_RS37105	0.26	+0.6
3,788,909	+		RR42_RS37105	0.30	+0.1
3,788,909	+		RR42_RS37105	0.30	+0.1
3,788,910	-		RR42_RS37105	0.30	-0.1
3,788,910	-		RR42_RS37105	0.30	-1.7
3,788,910	-		RR42_RS37105	0.30	-0.5
3,788,910	-		RR42_RS37105	0.30	+0.5
3,788,910	-		RR42_RS37105	0.30	+0.1
3,788,912	+		RR42_RS37105	0.31	-0.1
3,788,912	+		RR42_RS37105	0.31	-0.5
3,788,913	-		RR42_RS37105	0.31	+0.5
3,788,955	+		RR42_RS37105	0.48	-1.9
3,788,955	+		RR42_RS37105	0.48	-1.3
3,788,956	-		RR42_RS37105	0.49	+0.2
3,789,088	+				+0.9
3,789,088	+				-0.8
3,789,089	-				+0.5
3,789,139	+				-2.0
3,789,140	-				+0.5
3,789,140	-				-0.0
3,789,140	-				-0.7
3,789,160	-				+2.7
3,789,459	+		RR42_RS37110	0.73	-1.0
3,789,459	+		RR42_RS37110	0.73	-0.3
3,789,459	+		RR42_RS37110	0.73	+1.1
3,789,460	-		RR42_RS37110	0.74	-1.3
3,789,530	+		RR42_RS37110	0.89	-0.8
3,789,599	+				-0.2
3,789,624	+				-1.1
3,789,624	+				+0.6
3,789,624	+				-0.9
3,789,681	+				+1.5
3,789,681	+				-0.4
3,789,681	+				+0.1
3,789,681	+				+0.9
3,789,813	-				-1.3
3,789,831	+				-0.3
3,789,863	+				+0.9
3,789,863	+				-0.7
3,789,863	+				-2.0
3,789,864	-				+0.7
3,789,864	-				-1.0
3,789,886	+				-0.2
3,789,886	+				+1.8
3,789,887	-				-0.1
3,790,011	-		RR42_RS37115	0.68	+0.3
3,790,121	+				+0.2
3,790,121	+				-0.1
3,790,127	+				-1.9
3,790,127	+				+0.7
3,790,128	-				-0.9
3,790,210	+		RR42_RS37120	0.19	-0.8
3,790,211	-		RR42_RS37120	0.19	-0.8
3,790,211	-		RR42_RS37120	0.19	+0.1
3,790,360	+		RR42_RS37120	0.54	+0.8
3,790,361	-		RR42_RS37120	0.54	-0.1
3,790,361	-		RR42_RS37120	0.54	+0.5
3,790,361	-		RR42_RS37120	0.54	-0.0
3,790,438	-		RR42_RS37120	0.72	-0.1
3,790,438	-		RR42_RS37120	0.72	+0.1
3,790,493	-		RR42_RS37120	0.84	-0.0
3,790,515	-		RR42_RS37120	0.90	+0.4
3,790,523	+				-1.0
3,790,523	+				+1.4
3,790,540	+				-0.1
3,790,540	+				-0.5
3,790,541	-				+0.6
3,790,541	-				+0.1
3,790,541	-				+0.9
3,790,541	-				+0.5
3,790,557	+				+0.1
3,790,561	+				+0.1
3,790,561	+				-0.2
3,790,561	+				+0.1