Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36610
Experiment: R2A with A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with A22 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,667,778 | + | RR42_RS36605 | 0.38 | +0.3 | |
3,667,778 | + | RR42_RS36605 | 0.38 | -0.4 | |
3,667,778 | + | RR42_RS36605 | 0.38 | -0.2 | |
3,667,779 | - | RR42_RS36605 | 0.38 | +1.3 | |
3,667,779 | - | RR42_RS36605 | 0.38 | -1.7 | |
3,668,633 | + | +0.2 | |||
3,668,697 | - | +0.4 | |||
3,668,700 | + | +1.3 | |||
3,668,701 | - | -2.6 | |||
3,668,869 | - | RR42_RS36610 | 0.23 | +0.6 | |
3,669,043 | + | RR42_RS36610 | 0.43 | +1.1 | |
3,669,695 | + | RR42_RS36615 | 0.18 | -1.2 | |
3,669,969 | + | RR42_RS36615 | 0.50 | +0.2 | |
3,669,969 | + | RR42_RS36615 | 0.50 | -0.9 | |
3,669,970 | - | RR42_RS36615 | 0.50 | +1.1 | |
3,669,974 | + | RR42_RS36615 | 0.51 | +1.3 | |
3,670,118 | + | RR42_RS36615 | 0.68 | +0.1 | |
3,670,130 | + | RR42_RS36615 | 0.69 | -1.5 | |
3,670,144 | - | RR42_RS36615 | 0.71 | +0.1 | |
3,670,529 | - | -0.0 |
Or see this region's nucleotide sequence