Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34490

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,168,987	+		RR42_RS34485	0.75	-0.2
3,169,181	+				-2.4
3,169,229	-				+0.7
3,169,470	+				-0.1
3,169,470	+				-0.7
3,169,470	+				-0.1
3,169,475	+				+0.8
3,169,476	-				-2.5
3,169,739	+				-0.7
3,169,740	-				+0.2
3,169,844	+				+0.0
3,170,168	+		RR42_RS34490	0.27	-0.8
3,170,168	+		RR42_RS34490	0.27	-0.7
3,170,169	-		RR42_RS34490	0.27	-0.3
3,170,170	+		RR42_RS34490	0.28	+0.3
3,170,170	+		RR42_RS34490	0.28	-0.5
3,170,170	+		RR42_RS34490	0.28	-0.2
3,170,170	+		RR42_RS34490	0.28	+0.6
3,170,170	+		RR42_RS34490	0.28	+0.6
3,170,171	-		RR42_RS34490	0.28	-0.4
3,170,171	-		RR42_RS34490	0.28	+0.5
3,170,171	-		RR42_RS34490	0.28	-0.3
3,170,171	-		RR42_RS34490	0.28	-0.8
3,170,458	-		RR42_RS34490	0.69	-1.3
3,170,458	-		RR42_RS34490	0.69	-0.1
3,170,603	-				-0.4
3,170,652	+				-1.2
3,170,653	-				+0.0
3,170,667	+				+0.1
3,170,669	+				-1.3
3,170,669	+				-0.2
3,170,670	-				+0.2
3,170,685	+				+2.3
3,171,101	-		RR42_RS34495	0.36	-0.6
3,171,101	-		RR42_RS34495	0.36	-0.0
3,171,101	-		RR42_RS34495	0.36	+1.2
3,171,104	-		RR42_RS34495	0.36	+0.1
3,171,127	+		RR42_RS34495	0.38	+0.5
3,171,127	+		RR42_RS34495	0.38	+0.4
3,171,127	+		RR42_RS34495	0.38	-0.4
3,171,128	-		RR42_RS34495	0.38	+0.6
3,171,128	-		RR42_RS34495	0.38	-0.1
3,171,128	-		RR42_RS34495	0.38	-1.8
3,171,128	-		RR42_RS34495	0.38	-0.0
3,171,128	-		RR42_RS34495	0.38	+0.4
3,171,128	-		RR42_RS34495	0.38	-0.6
3,171,128	-		RR42_RS34495	0.38	+1.0
3,171,128	-		RR42_RS34495	0.38	+0.3
3,171,128	-		RR42_RS34495	0.38	+0.1
3,171,128	-		RR42_RS34495	0.38	+0.4
3,171,185	+		RR42_RS34495	0.44	+1.0
3,171,340	+		RR42_RS34495	0.58	-1.9
3,171,341	-		RR42_RS34495	0.58	-0.7
3,171,457	+		RR42_RS34495	0.69	+0.4
3,171,457	+		RR42_RS34495	0.69	-0.2
3,171,457	+		RR42_RS34495	0.69	+0.5
3,171,458	-		RR42_RS34495	0.69	+0.4
3,171,458	-		RR42_RS34495	0.69	+0.3
3,171,458	-		RR42_RS34495	0.69	-1.1
3,171,493	+		RR42_RS34495	0.73	-0.3
3,171,494	-		RR42_RS34495	0.73	+0.6