Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34220

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,100,496	+				+0.5
3,100,537	-				+0.2
3,100,582	+				+0.1
3,100,614	-				+1.2
3,100,730	-				+0.5
3,100,731	+				+0.3
3,100,731	+				+0.7
3,100,731	+				+0.2
3,100,893	+		RR42_RS34215	0.45	-1.1
3,101,308	+				+0.6
3,101,309	-				+0.6
3,101,547	-				-1.4
3,101,547	-				+0.8
3,101,852	+		RR42_RS34220	0.19	-0.2
3,101,853	-		RR42_RS34220	0.19	+0.5
3,101,906	+		RR42_RS34220	0.21	-2.4
3,101,907	-		RR42_RS34220	0.21	-0.1
3,101,907	-		RR42_RS34220	0.21	-1.5
3,101,930	+		RR42_RS34220	0.22	+1.4
3,101,931	-		RR42_RS34220	0.22	+1.0
3,101,931	-		RR42_RS34220	0.22	-0.5
3,101,933	+		RR42_RS34220	0.22	-0.0
3,101,933	+		RR42_RS34220	0.22	-0.6
3,102,194	+		RR42_RS34220	0.32	-1.1
3,102,197	+		RR42_RS34220	0.32	-0.1
3,102,202	-		RR42_RS34220	0.32	+0.5
3,102,202	-		RR42_RS34220	0.32	-0.4
3,102,203	+		RR42_RS34220	0.32	+0.0
3,102,203	+		RR42_RS34220	0.32	+0.1
3,102,203	+		RR42_RS34220	0.32	-0.1
3,102,203	+		RR42_RS34220	0.32	-0.8
3,102,204	-		RR42_RS34220	0.32	+0.2
3,102,204	-		RR42_RS34220	0.32	+0.4
3,102,204	-		RR42_RS34220	0.32	+0.3
3,102,204	-		RR42_RS34220	0.32	-0.0
3,102,204	-		RR42_RS34220	0.32	+0.5
3,102,236	+		RR42_RS34220	0.33	-0.8
3,102,236	+		RR42_RS34220	0.33	+0.4
3,102,237	-		RR42_RS34220	0.33	+0.7
3,102,237	-		RR42_RS34220	0.33	+0.5
3,102,323	+		RR42_RS34220	0.36	+0.3
3,102,324	-		RR42_RS34220	0.37	-0.2
3,102,324	-		RR42_RS34220	0.37	-0.4
3,102,326	+		RR42_RS34220	0.37	-0.9
3,102,327	-		RR42_RS34220	0.37	-0.1
3,102,357	-		RR42_RS34220	0.38	+0.2
3,102,357	-		RR42_RS34220	0.38	+1.9
3,102,378	-		RR42_RS34220	0.39	-0.6
3,102,674	+		RR42_RS34220	0.50	+0.1
3,102,674	+		RR42_RS34220	0.50	+0.5
3,102,674	+		RR42_RS34220	0.50	+1.2
3,102,674	+		RR42_RS34220	0.50	+0.5
3,102,750	+		RR42_RS34220	0.52	+0.5
3,102,882	-		RR42_RS34220	0.57	+1.7
3,102,924	+		RR42_RS34220	0.59	-0.6
3,102,995	+		RR42_RS34220	0.62	-0.2
3,103,025	+		RR42_RS34220	0.63	+1.2
3,103,230	+		RR42_RS34220	0.70	+0.0
3,103,230	+		RR42_RS34220	0.70	+0.5
3,103,231	-		RR42_RS34220	0.70	+1.0
3,103,382	+		RR42_RS34220	0.76	-0.1
3,103,383	-		RR42_RS34220	0.76	-0.3
3,103,383	-		RR42_RS34220	0.76	+0.2
3,103,461	-		RR42_RS34220	0.79	+1.4
3,103,496	+		RR42_RS34220	0.80	-0.2
3,103,661	+		RR42_RS34220	0.86	-0.4
3,103,661	+		RR42_RS34220	0.86	-0.2
3,103,661	+		RR42_RS34220	0.86	+0.2
3,103,662	-		RR42_RS34220	0.87	-0.1
3,103,662	-		RR42_RS34220	0.87	-0.8
3,103,662	-		RR42_RS34220	0.87	-0.0
3,103,662	-		RR42_RS34220	0.87	+1.1
3,103,662	-		RR42_RS34220	0.87	-0.1
3,103,796	-				-0.6
3,103,796	-				+0.3
3,103,823	+				+0.8
3,104,052	-				-0.4
3,104,052	-				+0.3
3,104,061	+				+0.1
3,104,121	+				-0.2
3,104,121	+				-0.2
3,104,199	+				-0.2
3,104,262	+				-3.4
3,104,262	+				+0.2
3,104,263	-				+0.7
3,104,273	-				-0.7
3,104,367	+				-2.6
3,104,368	-				-0.2
3,104,437	+		RR42_RS34225	0.12	+0.1
3,104,512	-		RR42_RS34225	0.17	+0.7
3,104,619	+		RR42_RS34225	0.24	-0.7
3,104,620	-		RR42_RS34225	0.24	+1.2
3,104,620	-		RR42_RS34225	0.24	-1.4
3,104,620	-		RR42_RS34225	0.24	-1.5
3,104,751	+		RR42_RS34225	0.32	+0.6
3,104,751	+		RR42_RS34225	0.32	+0.2
3,104,752	-		RR42_RS34225	0.32	-0.1