Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34050

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,068,351	+				+0.2
3,068,364	-				-0.8
3,068,415	-				-0.3
3,068,441	-		RR42_RS34045	0.12	-0.0
3,068,441	-		RR42_RS34045	0.12	+0.7
3,068,529	+		RR42_RS34045	0.23	+0.3
3,068,529	+		RR42_RS34045	0.23	+0.4
3,068,530	-		RR42_RS34045	0.23	-1.2
3,068,530	-		RR42_RS34045	0.23	+0.1
3,068,530	-		RR42_RS34045	0.23	-0.1
3,068,815	-		RR42_RS34045	0.57	-0.1
3,068,815	-		RR42_RS34045	0.57	+0.2
3,068,950	-		RR42_RS34045	0.72	-0.1
3,068,985	+		RR42_RS34045	0.77	-0.0
3,068,986	-		RR42_RS34045	0.77	-0.5
3,069,063	+		RR42_RS34045	0.86	+2.2
3,069,063	+		RR42_RS34045	0.86	-0.7
3,069,063	+		RR42_RS34045	0.86	-0.3
3,069,063	+		RR42_RS34045	0.86	+2.3
3,069,063	+		RR42_RS34045	0.86	+0.5
3,069,064	-		RR42_RS34045	0.86	-0.7
3,069,064	-		RR42_RS34045	0.86	-0.1
3,069,064	-		RR42_RS34045	0.86	+0.9
3,069,064	-		RR42_RS34045	0.86	+0.1
3,069,064	-		RR42_RS34045	0.86	-0.1
3,069,318	+		RR42_RS34050	0.20	+0.1
3,069,318	+		RR42_RS34050	0.20	-1.3
3,069,318	+		RR42_RS34050	0.20	+0.9
3,069,319	-		RR42_RS34050	0.21	-0.5
3,069,375	+		RR42_RS34050	0.35	+0.6
3,069,540	-		RR42_RS34050	0.76	+1.1
3,069,743	+				+1.0
3,069,743	+				+0.2
3,069,743	+				+0.5
3,069,743	+				-0.2
3,069,744	-				+0.6
3,069,828	+		RR42_RS34055	0.15	-0.5
3,069,828	+		RR42_RS34055	0.15	-1.4
3,069,829	-		RR42_RS34055	0.15	+0.9
3,069,829	-		RR42_RS34055	0.15	-2.2
3,070,169	+		RR42_RS34055	0.42	+0.2
3,070,169	+		RR42_RS34055	0.42	-0.1
3,070,170	-		RR42_RS34055	0.42	-2.1
3,070,170	-		RR42_RS34055	0.42	-1.8
3,070,170	-		RR42_RS34055	0.42	-0.9
3,070,266	-		RR42_RS34055	0.50	-1.0
3,070,266	-		RR42_RS34055	0.50	-1.0
3,070,423	+		RR42_RS34055	0.62	-0.7
3,070,428	-		RR42_RS34055	0.63	-0.7
3,070,428	-		RR42_RS34055	0.63	+0.4
3,070,428	-		RR42_RS34055	0.63	+1.3
3,070,497	-		RR42_RS34055	0.68	+0.4
3,070,614	+		RR42_RS34055	0.78	-2.1
3,070,615	-		RR42_RS34055	0.78	+1.3
3,070,635	+		RR42_RS34055	0.79	-0.2