Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33885

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,029,874	-		RR42_RS33880	0.57	-1.3
3,029,881	+		RR42_RS33880	0.58	-0.2
3,029,881	+		RR42_RS33880	0.58	-0.1
3,029,882	-		RR42_RS33880	0.58	-0.1
3,029,911	+		RR42_RS33880	0.61	-0.2
3,029,938	+		RR42_RS33880	0.64	-1.4
3,029,938	+		RR42_RS33880	0.64	-1.1
3,029,939	-		RR42_RS33880	0.64	+0.0
3,030,043	+		RR42_RS33880	0.75	-1.0
3,030,044	-		RR42_RS33880	0.75	+0.8
3,030,084	+		RR42_RS33880	0.79	+0.3
3,030,109	+		RR42_RS33880	0.82	+0.3
3,030,109	+		RR42_RS33880	0.82	-0.4
3,030,110	-		RR42_RS33880	0.82	+0.2
3,030,266	+				-1.1
3,030,266	+				-0.1
3,030,266	+				-0.0
3,030,319	+				+0.4
3,030,319	+				+0.2
3,030,320	-				-0.3
3,030,366	+				+0.0
3,030,367	-				+0.9
3,030,368	+				-0.1
3,030,369	-				+0.7
3,030,374	+				-0.1
3,030,375	-				+0.5
3,030,375	-				-0.5
3,030,375	-				-0.7
3,030,381	+				+0.6
3,030,381	+				+0.2
3,030,382	-				+1.5
3,030,439	+				-0.7
3,030,440	-				+0.2
3,030,665	-		RR42_RS33885	0.28	-0.7
3,030,718	+		RR42_RS33885	0.33	-1.7
3,030,718	+		RR42_RS33885	0.33	-0.1
3,030,719	-		RR42_RS33885	0.33	-0.7
3,030,719	-		RR42_RS33885	0.33	-0.7
3,030,719	-		RR42_RS33885	0.33	-1.2
3,030,719	-		RR42_RS33885	0.33	-0.6
3,030,719	-		RR42_RS33885	0.33	+1.3
3,031,078	-		RR42_RS33885	0.72	+0.5
3,031,237	+		RR42_RS33885	0.89	+0.2
3,031,275	+				-0.5
3,031,334	-				+0.6
3,031,339	+				+0.1
3,031,346	-				+0.3
3,031,351	+				+0.1
3,031,357	+				-0.2
3,031,358	-				-0.9
3,031,358	-				+0.3
3,031,358	-				+0.8
3,031,538	+		RR42_RS33890	0.11	-0.7
3,031,538	+		RR42_RS33890	0.11	+0.2
3,031,643	+		RR42_RS33890	0.19	-1.1
3,032,276	+		RR42_RS33890	0.62	+0.1
3,032,276	+		RR42_RS33890	0.62	+0.7