Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33825

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,017,070	+		RR42_RS33820	0.44	-1.0
3,017,070	+		RR42_RS33820	0.44	-0.5
3,017,071	-		RR42_RS33820	0.44	-0.4
3,017,071	-		RR42_RS33820	0.44	+1.3
3,017,071	-		RR42_RS33820	0.44	-0.0
3,017,072	+		RR42_RS33820	0.44	-0.0
3,017,072	+		RR42_RS33820	0.44	+2.5
3,017,072	+		RR42_RS33820	0.44	-0.1
3,017,072	+		RR42_RS33820	0.44	+0.9
3,017,072	+		RR42_RS33820	0.44	-0.4
3,017,073	-		RR42_RS33820	0.44	-0.4
3,017,099	+		RR42_RS33820	0.47	+0.9
3,017,099	+		RR42_RS33820	0.47	+1.6
3,017,465	+		RR42_RS33820	0.77	+0.7
3,017,466	-		RR42_RS33820	0.77	+0.1
3,017,721	-				-0.1
3,017,736	+				-0.2
3,017,736	+				+0.7
3,017,737	-				+0.3
3,017,756	-				+0.0
3,017,826	+				+1.4
3,017,826	+				-0.3
3,017,827	-				-1.3
3,017,852	-				-0.4
3,017,876	-				+0.5
3,017,876	-				-1.2
3,018,102	+		RR42_RS33825	0.23	-0.2
3,018,103	-		RR42_RS33825	0.23	-0.5
3,018,415	-		RR42_RS33825	0.58	+0.4
3,018,415	-		RR42_RS33825	0.58	+0.5
3,018,717	+				-0.2
3,018,798	+				-0.5
3,018,798	+				+0.6
3,018,819	+				-1.2
3,018,819	+				-0.1
3,018,820	-				-0.5
3,018,877	+				+0.1
3,018,878	-				+0.2
3,018,900	-				-0.2
3,019,086	-				+0.1
3,019,192	+				-0.9
3,019,292	+		RR42_RS33830	0.12	-0.8
3,019,293	-		RR42_RS33830	0.12	-0.7
3,019,532	+		RR42_RS33830	0.19	+0.4
3,019,533	-		RR42_RS33830	0.19	+0.8
3,019,533	-		RR42_RS33830	0.19	-0.1
3,019,579	+		RR42_RS33830	0.20	-0.3
3,019,580	-		RR42_RS33830	0.21	-0.2
3,019,580	-		RR42_RS33830	0.21	-1.5
3,019,622	-		RR42_RS33830	0.22	-0.2
3,019,622	-		RR42_RS33830	0.22	+0.1
3,019,700	+		RR42_RS33830	0.24	+0.5