Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33490

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,927,729	-		RR42_RS33480	0.49	+0.5
2,927,729	-		RR42_RS33480	0.49	-0.4
2,927,729	-		RR42_RS33480	0.49	+0.4
2,927,729	-		RR42_RS33480	0.49	-0.0
2,927,821	+		RR42_RS33480	0.60	-0.1
2,927,858	+		RR42_RS33480	0.64	-1.0
2,927,858	+		RR42_RS33480	0.64	-0.4
2,927,859	-		RR42_RS33480	0.65	+1.1
2,927,872	+		RR42_RS33480	0.66	-0.4
2,927,872	+		RR42_RS33480	0.66	-0.9
2,927,873	-		RR42_RS33480	0.66	-1.2
2,927,892	+		RR42_RS33480	0.69	+0.6
2,927,902	+		RR42_RS33480	0.70	-1.2
2,927,903	-		RR42_RS33480	0.70	-0.1
2,927,971	+		RR42_RS33480	0.78	-0.4
2,927,971	+		RR42_RS33480	0.78	-0.4
2,927,972	-		RR42_RS33480	0.78	+0.9
2,927,972	-		RR42_RS33480	0.78	-0.3
2,928,210	+				-0.2
2,928,210	+				+0.3
2,928,544	+		RR42_RS33485	0.85	+0.3
2,928,544	+		RR42_RS33485	0.85	-0.1
2,928,545	-		RR42_RS33485	0.85	+0.4
2,928,771	-				+0.1
2,928,824	+		RR42_RS33490	0.13	+0.1
2,928,824	+		RR42_RS33490	0.13	+0.3
2,928,824	+		RR42_RS33490	0.13	+0.3
2,928,824	+		RR42_RS33490	0.13	+0.5
2,928,824	+		RR42_RS33490	0.13	+1.9
2,928,825	-		RR42_RS33490	0.13	+0.4
2,928,825	-		RR42_RS33490	0.13	-0.7
2,928,825	-		RR42_RS33490	0.13	+1.1
2,928,961	-		RR42_RS33490	0.24	+1.1
2,929,025	+		RR42_RS33490	0.30	-0.3
2,929,025	+		RR42_RS33490	0.30	+0.4
2,929,026	-		RR42_RS33490	0.30	-0.4
2,929,189	+		RR42_RS33490	0.43	+0.5
2,929,233	-		RR42_RS33490	0.47	+0.6
2,929,428	-		RR42_RS33490	0.63	+0.6
2,929,433	+		RR42_RS33490	0.63	-0.1
2,929,433	+		RR42_RS33490	0.63	+1.5
2,929,523	+		RR42_RS33490	0.71	+1.7
2,929,523	+		RR42_RS33490	0.71	+0.5
2,929,524	-		RR42_RS33490	0.71	+0.2
2,929,679	+		RR42_RS33490	0.84	-0.0
2,929,766	+				+0.7
2,929,794	-				+0.3
2,929,877	+				-0.4
2,929,877	+				+0.3
2,929,878	-				+0.7
2,929,940	-				+3.2
2,929,999	+				-0.1
2,930,000	-				-1.3
2,930,038	+				-0.2
2,930,068	+				-0.5
2,930,068	+				-0.3
2,930,069	-				-0.4
2,930,069	-				+0.1
2,930,077	+				-0.2
2,930,077	+				+0.2
2,930,078	-		RR42_RS33495	0.10	-0.7
2,930,078	-		RR42_RS33495	0.10	+0.1
2,930,084	+		RR42_RS33495	0.10	-1.1
2,930,110	+		RR42_RS33495	0.12	+0.9
2,930,110	+		RR42_RS33495	0.12	-2.1
2,930,110	+		RR42_RS33495	0.12	+0.3
2,930,110	+		RR42_RS33495	0.12	-0.2
2,930,110	+		RR42_RS33495	0.12	+0.6
2,930,110	+		RR42_RS33495	0.12	-0.3
2,930,110	+		RR42_RS33495	0.12	-0.5
2,930,110	+		RR42_RS33495	0.12	-0.7
2,930,111	-		RR42_RS33495	0.12	-1.9
2,930,111	-		RR42_RS33495	0.12	-0.5
2,930,111	-		RR42_RS33495	0.12	-0.1
2,930,276	-		RR42_RS33495	0.24	-0.2
2,930,276	-		RR42_RS33495	0.24	+1.7
2,930,276	-		RR42_RS33495	0.24	-0.2
2,930,416	+		RR42_RS33495	0.34	-1.4
2,930,416	+		RR42_RS33495	0.34	-0.6
2,930,417	-		RR42_RS33495	0.34	-0.7
2,930,417	-		RR42_RS33495	0.34	+0.0
2,930,431	+		RR42_RS33495	0.35	+0.4
2,930,584	+		RR42_RS33495	0.46	+0.7
2,930,584	+		RR42_RS33495	0.46	-0.1
2,930,585	-		RR42_RS33495	0.46	-0.2
2,930,585	-		RR42_RS33495	0.46	-0.2
2,930,585	-		RR42_RS33495	0.46	+0.6
2,930,603	-		RR42_RS33495	0.48	+1.0
2,930,812	+		RR42_RS33495	0.63	+0.2