Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33385

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,903,513	-				-0.2
2,903,738	+				+0.0
2,903,739	-				+0.7
2,903,739	-				+0.4
2,903,786	+				+1.4
2,903,804	+				+1.2
2,903,804	+				-0.9
2,903,804	+				-0.6
2,903,804	+				-0.1
2,903,804	+				-0.3
2,903,908	-				+0.7
2,903,924	+				+1.0
2,903,925	-				+0.3
2,903,925	-				-0.8
2,903,984	-				-0.0
2,903,993	+				-0.2
2,903,994	-				+0.5
2,904,048	-				+1.3
2,904,059	+				+2.6
2,904,068	+				+0.4
2,904,078	+				+0.1
2,904,079	-				+0.6
2,904,079	-				+0.8
2,904,079	-				+0.3
2,904,079	-				+0.8
2,904,079	-				+1.9
2,904,124	-				+0.5
2,904,125	+				+1.0
2,904,126	-				+0.6
2,904,313	+				+1.1
2,904,339	+				+0.3
2,904,339	+				+0.5
2,904,339	+				+1.1
2,904,339	+				-0.6
2,904,339	+				+0.4
2,904,339	+				+1.0
2,904,339	+				+0.9
2,904,340	-				-0.4
2,904,340	-				+1.2
2,904,351	+				+0.6
2,904,352	-				-0.9
2,904,352	-				+1.7
2,904,352	-				+0.8
2,904,421	-				+0.5
2,904,603	+		RR42_RS33385	0.13	+0.9
2,904,603	+		RR42_RS33385	0.13	+0.9
2,904,603	+		RR42_RS33385	0.13	+1.2
2,904,603	+		RR42_RS33385	0.13	+1.3
2,904,604	-		RR42_RS33385	0.14	+0.6
2,904,604	-		RR42_RS33385	0.14	+1.7
2,904,604	-		RR42_RS33385	0.14	-1.4
2,904,606	+		RR42_RS33385	0.14	+1.0
2,904,621	+		RR42_RS33385	0.16	-1.5
2,904,622	-		RR42_RS33385	0.16	+0.7
2,904,741	+		RR42_RS33385	0.32	+0.5
2,904,741	+		RR42_RS33385	0.32	+0.4
2,904,741	+		RR42_RS33385	0.32	-1.3
2,904,741	+		RR42_RS33385	0.32	-0.6
2,904,741	+		RR42_RS33385	0.32	+1.3
2,904,887	-		RR42_RS33385	0.52	+0.9
2,904,916	+		RR42_RS33385	0.56	+0.6
2,904,917	-		RR42_RS33385	0.56	+0.1
2,904,917	-		RR42_RS33385	0.56	+0.1
2,904,917	-		RR42_RS33385	0.56	+0.7
2,904,917	-		RR42_RS33385	0.56	+0.4
2,904,917	-		RR42_RS33385	0.56	+1.6
2,904,933	+		RR42_RS33385	0.58	+0.4
2,904,934	-		RR42_RS33385	0.59	+0.1
2,905,158	+		RR42_RS33385	0.89	-0.1
2,905,210	+				-0.0
2,905,211	-				+1.1
2,905,306	+				+0.1
2,905,306	+				-0.1
2,905,306	+				+1.2
2,905,306	+				+0.5
2,905,307	-				-0.5
2,905,307	-				-0.0
2,905,592	+		RR42_RS33390	0.11	-0.4
2,905,655	+		RR42_RS33390	0.15	+1.2
2,905,655	+		RR42_RS33390	0.15	-0.1
2,905,655	+		RR42_RS33390	0.15	+0.4
2,905,655	+		RR42_RS33390	0.15	-2.1
2,905,655	+		RR42_RS33390	0.15	-0.4
2,905,655	+		RR42_RS33390	0.15	+2.1
2,905,656	-		RR42_RS33390	0.15	+0.1
2,905,656	-		RR42_RS33390	0.15	+1.0
2,905,656	-		RR42_RS33390	0.15	+0.5
2,905,656	-		RR42_RS33390	0.15	-0.1
2,906,033	+		RR42_RS33390	0.37	+0.3
2,906,034	-		RR42_RS33390	0.37	+0.2
2,906,132	+		RR42_RS33390	0.43	-0.5
2,906,132	+		RR42_RS33390	0.43	+0.4
2,906,132	+		RR42_RS33390	0.43	-0.6
2,906,132	+		RR42_RS33390	0.43	+0.9
2,906,132	+		RR42_RS33390	0.43	+1.0
2,906,133	-		RR42_RS33390	0.43	-1.1
2,906,133	-		RR42_RS33390	0.43	+0.2
2,906,133	-		RR42_RS33390	0.43	-0.8
2,906,133	-		RR42_RS33390	0.43	-0.1
2,906,133	-		RR42_RS33390	0.43	-0.2
2,906,162	+		RR42_RS33390	0.45	-0.3
2,906,187	-		RR42_RS33390	0.46	-1.3