Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33055

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,821,222	-		RR42_RS33050	0.26	-0.2
2,821,222	-		RR42_RS33050	0.26	+0.2
2,821,222	-		RR42_RS33050	0.26	-0.5
2,821,222	-		RR42_RS33050	0.26	+0.6
2,821,403	+		RR42_RS33050	0.45	+1.3
2,821,403	+		RR42_RS33050	0.45	+0.2
2,821,404	-		RR42_RS33050	0.45	+0.3
2,821,491	-		RR42_RS33050	0.54	+0.7
2,821,493	-		RR42_RS33050	0.54	-0.2
2,821,514	+		RR42_RS33050	0.56	+0.8
2,821,514	+		RR42_RS33050	0.56	+0.0
2,821,515	-		RR42_RS33050	0.56	+0.4
2,821,545	+		RR42_RS33050	0.59	+0.2
2,821,704	-		RR42_RS33050	0.76	+0.3
2,821,811	-		RR42_RS33050	0.87	+0.7
2,821,879	+				+1.3
2,821,880	-				+0.0
2,821,880	-				+0.3
2,821,885	+				-0.0
2,821,886	-				-0.3
2,822,103	-		RR42_RS33055	0.13	+0.1
2,822,626	+		RR42_RS33055	0.60	-0.7
2,822,627	-		RR42_RS33055	0.60	+1.1
2,822,863	+		RR42_RS33055	0.82	+0.4
2,822,863	+		RR42_RS33055	0.82	+0.5
2,822,863	+		RR42_RS33055	0.82	+0.7
2,822,864	-		RR42_RS33055	0.82	+0.7
2,822,864	-		RR42_RS33055	0.82	-0.0
2,822,864	-		RR42_RS33055	0.82	+1.0
2,822,864	-		RR42_RS33055	0.82	+0.8
2,823,065	-				-0.3
2,823,065	-				+1.1
2,823,104	-				+0.3
2,823,206	-		RR42_RS33060	0.11	-0.3
2,823,317	-		RR42_RS33060	0.22	-2.3
2,823,325	+		RR42_RS33060	0.23	+0.8
2,823,325	+		RR42_RS33060	0.23	+0.4
2,823,326	-		RR42_RS33060	0.23	+0.4
2,823,433	+		RR42_RS33060	0.34	+0.6
2,823,462	-		RR42_RS33060	0.37	+0.2
2,823,496	+		RR42_RS33060	0.41	+1.6
2,823,517	+		RR42_RS33060	0.43	-1.3
2,823,517	+		RR42_RS33060	0.43	-1.7
2,823,518	-		RR42_RS33060	0.43	+0.5
2,823,518	-		RR42_RS33060	0.43	+1.3
2,823,743	-		RR42_RS33060	0.66	-0.4
2,823,806	-		RR42_RS33060	0.73	-1.5
2,823,806	-		RR42_RS33060	0.73	-0.6
2,823,878	+		RR42_RS33060	0.80	+0.3
2,823,879	-		RR42_RS33060	0.80	-0.2