Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33035

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,815,714	+		RR42_RS33030	0.50	+0.4
2,815,721	+		RR42_RS33030	0.50	-0.3
2,815,722	-		RR42_RS33030	0.50	-0.1
2,815,795	+		RR42_RS33030	0.55	+0.4
2,815,795	+		RR42_RS33030	0.55	-0.9
2,815,798	+		RR42_RS33030	0.55	+0.2
2,815,798	+		RR42_RS33030	0.55	-0.7
2,815,843	+		RR42_RS33030	0.58	-0.3
2,815,843	+		RR42_RS33030	0.58	-2.1
2,815,843	+		RR42_RS33030	0.58	+0.3
2,815,844	-		RR42_RS33030	0.58	+0.1
2,815,853	+		RR42_RS33030	0.59	-0.6
2,815,853	+		RR42_RS33030	0.59	-0.1
2,815,853	+		RR42_RS33030	0.59	-0.4
2,815,854	-		RR42_RS33030	0.59	+1.0
2,815,854	-		RR42_RS33030	0.59	-0.2
2,815,854	-		RR42_RS33030	0.59	+1.6
2,815,854	-		RR42_RS33030	0.59	-0.2
2,815,855	+		RR42_RS33030	0.59	+0.1
2,815,855	+		RR42_RS33030	0.59	-2.3
2,815,874	-		RR42_RS33030	0.60	-0.1
2,815,874	-		RR42_RS33030	0.60	+0.8
2,815,942	+		RR42_RS33030	0.65	-0.8
2,815,943	-		RR42_RS33030	0.65	-0.7
2,815,947	+		RR42_RS33030	0.65	-2.2
2,815,948	-		RR42_RS33030	0.65	-0.6
2,815,969	+		RR42_RS33030	0.66	-0.7
2,815,970	-		RR42_RS33030	0.66	+0.1
2,815,974	-		RR42_RS33030	0.67	-0.1
2,816,005	-		RR42_RS33030	0.69	-1.7
2,816,005	-		RR42_RS33030	0.69	-0.4
2,816,106	+		RR42_RS33030	0.75	+0.6
2,816,119	+		RR42_RS33030	0.76	-0.8
2,816,120	-		RR42_RS33030	0.76	-0.0
2,816,206	+		RR42_RS33030	0.82	+0.7
2,816,206	+		RR42_RS33030	0.82	-1.7
2,816,206	+		RR42_RS33030	0.82	-0.6
2,816,367	+				-1.1
2,816,395	-				-0.5
2,816,457	+				-0.4
2,816,457	+				+0.1
2,816,457	+				-1.3
2,816,458	-				-0.7
2,816,458	-				+0.8
2,816,458	-				-1.5
2,816,459	+				+0.6
2,816,492	+				-1.0
2,816,739	-				-2.1
2,818,209	-		RR42_RS33035	0.66	-0.2
2,818,213	-		RR42_RS33035	0.67	-1.1
2,818,213	-		RR42_RS33035	0.67	+0.2
2,818,213	-		RR42_RS33035	0.67	+0.0
2,818,565	+		RR42_RS33035	0.81	-1.0
2,818,886	+				-0.3
2,818,886	+				+0.2
2,818,970	+				-0.7
2,818,970	+				-0.2
2,818,971	-				+0.3
2,819,010	-				-1.1
2,819,010	-				-0.1
2,819,105	+				+0.7
2,819,166	+				-0.4
2,819,166	+				+0.0
2,819,166	+				+1.2
2,819,187	+				-0.5
2,819,221	-				+0.6
2,819,363	+				+1.6
2,819,364	-				-0.7
2,819,474	+		RR42_RS33040	0.24	-0.4
2,819,474	+		RR42_RS33040	0.24	-0.0
2,819,474	+		RR42_RS33040	0.24	+0.2
2,819,513	-		RR42_RS33040	0.36	+0.1
2,819,846	+				+0.5
2,819,846	+				+0.4
2,819,964	+		RR42_RS33045	0.11	+0.3
2,819,964	+		RR42_RS33045	0.11	+0.2