Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32460

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,678,279	+		RR42_RS32455	0.21	-2.0
2,678,279	+		RR42_RS32455	0.21	+1.2
2,678,279	+		RR42_RS32455	0.21	-0.7
2,678,280	-		RR42_RS32455	0.22	-0.2
2,678,336	+		RR42_RS32455	0.27	-1.8
2,678,337	-		RR42_RS32455	0.27	-2.2
2,678,337	-		RR42_RS32455	0.27	-0.1
2,678,363	+		RR42_RS32455	0.29	+0.2
2,678,574	+		RR42_RS32455	0.49	-0.5
2,678,630	+		RR42_RS32455	0.55	-0.0
2,678,630	+		RR42_RS32455	0.55	-0.3
2,678,631	-		RR42_RS32455	0.55	+0.4
2,678,951	+		RR42_RS32455	0.85	+0.4
2,678,952	-		RR42_RS32455	0.85	+0.5
2,678,952	-		RR42_RS32455	0.85	-0.8
2,679,181	+				-0.3
2,679,181	+				+0.4
2,679,182	-				-0.6
2,679,187	+				+0.8
2,679,188	-				-0.1
2,679,189	+				+0.5
2,679,190	-				+0.8
2,679,266	+				-0.4
2,679,266	+				-0.4
2,679,267	-				+2.4
2,679,304	-				-1.5
2,679,446	+		RR42_RS32460	0.24	-0.0
2,679,757	+		RR42_RS32460	0.57	+1.3
2,680,046	+		RR42_RS32460	0.87	+1.1
2,680,047	-				+1.8
2,680,121	+				-0.4
2,680,122	-				+1.2
2,680,172	-				+0.4
2,680,392	+				+0.4
2,680,475	-				-0.6
2,680,477	+				-0.4
2,680,478	-				-0.1
2,680,492	+				+0.5
2,680,492	+				-0.5
2,680,492	+				-1.1
2,680,492	+				+0.2
2,680,492	+				-0.1
2,680,492	+				+0.2
2,680,492	+				+0.0
2,680,493	-				+0.4
2,680,493	-				+0.4
2,680,579	+		RR42_RS32465	0.14	+0.4
2,680,579	+		RR42_RS32465	0.14	+0.6
2,680,580	-		RR42_RS32465	0.14	-0.2
2,680,580	-		RR42_RS32465	0.14	+0.2
2,680,580	-		RR42_RS32465	0.14	-0.8
2,680,580	-		RR42_RS32465	0.14	+0.4
2,680,591	+		RR42_RS32465	0.15	+0.2
2,680,592	-		RR42_RS32465	0.15	+0.2
2,680,592	-		RR42_RS32465	0.15	-0.4
2,680,658	+		RR42_RS32465	0.19	-0.6
2,680,659	-		RR42_RS32465	0.19	-1.6
2,680,659	-		RR42_RS32465	0.19	-0.8
2,680,659	-		RR42_RS32465	0.19	-0.3
2,680,659	-		RR42_RS32465	0.19	-1.6
2,680,720	+		RR42_RS32465	0.24	-0.3
2,680,721	-		RR42_RS32465	0.24	+0.9
2,680,721	-		RR42_RS32465	0.24	+0.8
2,680,721	-		RR42_RS32465	0.24	+0.7
2,680,758	+		RR42_RS32465	0.26	-0.6
2,680,852	+		RR42_RS32465	0.33	-0.6
2,680,927	+		RR42_RS32465	0.38	-0.8
2,680,930	+		RR42_RS32465	0.39	-0.1
2,680,930	+		RR42_RS32465	0.39	+0.0
2,680,930	+		RR42_RS32465	0.39	-0.8
2,680,931	-		RR42_RS32465	0.39	+1.8
2,680,931	-		RR42_RS32465	0.39	+0.1
2,680,931	-		RR42_RS32465	0.39	-1.2
2,680,931	-		RR42_RS32465	0.39	+1.8
2,680,931	-		RR42_RS32465	0.39	+0.0