Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32270

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,627,240	-		RR42_RS32265	0.13	+0.7
2,627,314	+		RR42_RS32265	0.22	+0.3
2,627,315	-		RR42_RS32265	0.22	-0.2
2,627,317	+		RR42_RS32265	0.22	+0.1
2,627,317	+		RR42_RS32265	0.22	+0.9
2,627,318	-		RR42_RS32265	0.22	-0.3
2,627,434	+		RR42_RS32265	0.36	+0.8
2,627,435	-		RR42_RS32265	0.36	-0.6
2,627,435	-		RR42_RS32265	0.36	-0.3
2,627,521	-		RR42_RS32265	0.46	-2.9
2,627,593	+		RR42_RS32265	0.55	+1.8
2,627,593	+		RR42_RS32265	0.55	-0.6
2,627,594	-		RR42_RS32265	0.55	+0.2
2,627,594	-		RR42_RS32265	0.55	-0.6
2,627,594	-		RR42_RS32265	0.55	-1.2
2,627,601	+		RR42_RS32265	0.56	-0.1
2,627,601	+		RR42_RS32265	0.56	-0.0
2,627,601	+		RR42_RS32265	0.56	-1.2
2,627,602	-		RR42_RS32265	0.56	-0.4
2,627,607	-		RR42_RS32265	0.57	-0.1
2,627,746	+		RR42_RS32265	0.73	-1.0
2,627,747	-		RR42_RS32265	0.73	+1.1
2,627,747	-		RR42_RS32265	0.73	-1.9
2,627,822	+		RR42_RS32265	0.82	+1.1
2,627,822	+		RR42_RS32265	0.82	-1.6
2,627,823	-		RR42_RS32265	0.82	+0.0
2,627,823	-		RR42_RS32265	0.82	-1.7
2,627,848	+		RR42_RS32265	0.85	-1.0
2,627,848	+		RR42_RS32265	0.85	-0.2
2,627,848	+		RR42_RS32265	0.85	-0.2
2,627,848	+		RR42_RS32265	0.85	-0.1
2,627,849	-		RR42_RS32265	0.85	-0.5
2,627,849	-		RR42_RS32265	0.85	+0.7
2,627,849	-		RR42_RS32265	0.85	-0.5
2,627,900	+				+0.1
2,627,977	+				-0.6
2,627,977	+				-1.7
2,627,978	-				-0.7
2,627,978	-				+0.0
2,628,021	-				-0.0
2,628,021	-				-0.8
2,628,021	-				-0.1
2,628,086	+				+0.5
2,628,086	+				-0.5
2,628,088	+				-0.9
2,628,088	+				+0.7
2,628,088	+				+0.1
2,628,088	+				+1.5
2,628,088	+				-0.0
2,628,088	+				-0.7
2,628,088	+				-0.1
2,628,089	-				+0.2
2,628,089	-				+0.4
2,628,089	-				-0.3
2,628,089	-				-0.0
2,628,230	+				-1.2
2,628,231	-				-0.7
2,628,234	+				+0.3
2,628,290	+		RR42_RS32270	0.23	-1.5
2,628,308	+		RR42_RS32270	0.30	-0.6
2,628,478	+				-0.2
2,628,478	+				-0.4
2,628,478	+				-0.2
2,628,479	-				-0.1
2,628,479	-				+0.0
2,628,521	+				+0.5
2,628,532	+				+0.4
2,628,532	+				+1.1
2,628,532	+				-2.7
2,628,532	+				-0.9
2,628,532	+				-0.5
2,628,542	+				-1.2
2,629,022	-		RR42_RS32275	0.24	+0.7
2,629,136	+		RR42_RS32275	0.32	-0.2
2,629,136	+		RR42_RS32275	0.32	+0.8
2,629,136	+		RR42_RS32275	0.32	-0.2
2,629,136	+		RR42_RS32275	0.32	-1.3
2,629,136	+		RR42_RS32275	0.32	+0.3
2,629,137	-		RR42_RS32275	0.32	+0.3
2,629,137	-		RR42_RS32275	0.32	-2.1
2,629,175	+		RR42_RS32275	0.34	-0.9
2,629,175	+		RR42_RS32275	0.34	-0.0
2,629,176	-		RR42_RS32275	0.34	-0.3
2,629,176	-		RR42_RS32275	0.34	+0.6
2,629,176	-		RR42_RS32275	0.34	-0.1
2,629,259	+		RR42_RS32275	0.39	+0.7
2,629,260	-		RR42_RS32275	0.39	-1.2
2,629,319	+		RR42_RS32275	0.43	+0.3
2,629,319	+		RR42_RS32275	0.43	+0.0
2,629,319	+		RR42_RS32275	0.43	+0.7