Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30775

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,282,056	+		RR42_RS30770	0.46	+0.8
2,282,056	+		RR42_RS30770	0.46	+0.5
2,282,083	+		RR42_RS30770	0.49	-1.0
2,282,083	+		RR42_RS30770	0.49	-1.1
2,282,084	-		RR42_RS30770	0.49	-0.4
2,282,247	+		RR42_RS30770	0.70	-0.4
2,282,248	-		RR42_RS30770	0.70	-0.8
2,282,280	+		RR42_RS30770	0.74	-0.5
2,282,280	+		RR42_RS30770	0.74	+0.4
2,282,281	-		RR42_RS30770	0.75	-0.2
2,282,281	-		RR42_RS30770	0.75	+0.0
2,282,655	+				+0.0
2,282,656	-				+0.6
2,282,761	+				+0.0
2,282,762	-				-0.1
2,282,785	-				+0.2
2,283,056	+				+1.0
2,283,126	+		RR42_RS30775	0.12	-1.2
2,283,145	+		RR42_RS30775	0.13	-1.4
2,283,146	-		RR42_RS30775	0.13	+0.8
2,283,156	+		RR42_RS30775	0.14	-0.1
2,283,156	+		RR42_RS30775	0.14	+0.5
2,283,157	-		RR42_RS30775	0.14	+0.3
2,283,157	-		RR42_RS30775	0.14	-0.4
2,283,343	-		RR42_RS30775	0.30	+0.6
2,283,343	-		RR42_RS30775	0.30	-2.1
2,283,423	+		RR42_RS30775	0.37	-1.3
2,283,519	-		RR42_RS30775	0.46	+0.1
2,283,639	+		RR42_RS30775	0.56	-0.4
2,283,639	+		RR42_RS30775	0.56	-1.0
2,283,640	-		RR42_RS30775	0.56	-0.4
2,283,640	-		RR42_RS30775	0.56	+0.6
2,283,658	-		RR42_RS30775	0.58	+0.4
2,283,825	+		RR42_RS30775	0.73	-0.2
2,283,897	+		RR42_RS30775	0.79	-0.4
2,283,966	+		RR42_RS30775	0.85	+0.2
2,283,966	+		RR42_RS30775	0.85	-0.6
2,283,967	-		RR42_RS30775	0.85	+0.3
2,283,993	+		RR42_RS30775	0.87	-0.8
2,283,993	+		RR42_RS30775	0.87	+0.4
2,284,042	-				+0.8
2,284,059	+				-0.6
2,284,060	-				-0.1
2,284,060	-				-0.3
2,284,060	-				-0.2
2,284,090	+				-1.0
2,284,090	+				+0.5
2,284,091	-				+1.0
2,284,091	-				-0.2
2,284,091	-				-0.1
2,284,091	-				-2.3
2,284,137	+				+1.5
2,284,137	+				-0.6
2,284,207	+				+0.7
2,284,272	+				-0.4
2,284,273	-				-0.3
2,284,365	-				-0.5
2,284,520	-				-1.4
2,284,766	-		RR42_RS30785	0.15	-0.8
2,284,865	+		RR42_RS30785	0.23	+0.2
2,284,866	-		RR42_RS30785	0.23	+0.7
2,285,000	+		RR42_RS30785	0.33	+0.5
2,285,000	+		RR42_RS30785	0.33	-1.7
2,285,000	+		RR42_RS30785	0.33	+0.1
2,285,001	-		RR42_RS30785	0.33	-0.1
2,285,001	-		RR42_RS30785	0.33	+1.3
2,285,001	-		RR42_RS30785	0.33	-1.7
2,285,001	-		RR42_RS30785	0.33	+0.6
2,285,001	-		RR42_RS30785	0.33	+0.0
2,285,021	+		RR42_RS30785	0.35	+2.2
2,285,021	+		RR42_RS30785	0.35	+1.2
2,285,021	+		RR42_RS30785	0.35	-0.5
2,285,022	-		RR42_RS30785	0.35	+0.5
2,285,022	-		RR42_RS30785	0.35	-0.1
2,285,092	+		RR42_RS30785	0.40	-0.1
2,285,092	+		RR42_RS30785	0.40	+0.2
2,285,093	-		RR42_RS30785	0.40	+0.1
2,285,093	-		RR42_RS30785	0.40	+0.0
2,285,093	-		RR42_RS30785	0.40	+0.2
2,285,093	-		RR42_RS30785	0.40	+0.9
2,285,095	+		RR42_RS30785	0.41	-0.1
2,285,095	+		RR42_RS30785	0.41	-0.3
2,285,095	+		RR42_RS30785	0.41	-0.5
2,285,095	+		RR42_RS30785	0.41	-1.1
2,285,095	+		RR42_RS30785	0.41	+0.6
2,285,095	+		RR42_RS30785	0.41	+1.4
2,285,095	+		RR42_RS30785	0.41	+0.3
2,285,096	-		RR42_RS30785	0.41	+0.3