Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29725

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,038,191	-				+0.3
2,038,191	-				-0.3
2,038,191	-				+2.0
2,038,243	+				-0.1
2,038,244	-				+0.3
2,038,281	+				-0.5
2,038,281	+				+0.1
2,038,281	+				+0.3
2,038,281	+				-0.2
2,038,282	-				-0.4
2,038,282	-				+0.9
2,038,369	+				+0.2
2,038,500	+				-1.5
2,038,501	-				-0.1
2,038,536	+				-0.2
2,038,537	-				-0.2
2,038,537	-				+0.7
2,038,537	-				+0.4
2,038,560	-				-0.4
2,038,560	-				-0.7
2,038,560	-				-0.3
2,038,646	-				-1.9
2,038,714	-				+1.0
2,038,714	-				-0.4
2,038,827	+				+0.4
2,038,828	-				-0.1
2,038,846	+				-1.4
2,038,846	+				+1.1
2,038,847	-				+0.5
2,039,063	+				-0.9
2,039,064	-				+0.6
2,039,088	-				-0.4
2,039,107	+				-1.3
2,039,108	-				-1.1
2,039,113	+				-0.2
2,039,113	+				-2.1
2,039,113	+				-0.5
2,039,113	+				-1.3
2,039,113	+				+0.2
2,039,113	+				-1.0
2,039,114	-				+0.3
2,039,114	-				+1.1
2,039,114	-				-0.1
2,039,151	+				-1.1
2,039,151	+				+0.3
2,039,152	-				-0.6
2,039,232	+		RR42_RS29725	0.33	+0.9
2,039,233	-		RR42_RS29725	0.33	+0.0
2,039,252	+		RR42_RS29725	0.40	+0.8
2,039,253	-		RR42_RS29725	0.41	+1.2
2,039,302	+		RR42_RS29725	0.60	+0.6
2,039,303	-		RR42_RS29725	0.60	+0.6
2,039,306	+		RR42_RS29725	0.62	+0.4
2,039,318	-		RR42_RS29725	0.66	+0.1
2,039,318	-		RR42_RS29725	0.66	+0.0
2,039,413	-				-0.2
2,039,429	+				+0.1
2,039,448	-				+0.0
2,039,448	-				-0.1
2,039,587	-				-0.3
2,039,587	-				-0.1
2,039,587	-				-0.3
2,039,591	+				+1.9
2,039,602	+				-0.4
2,039,603	-				-0.6
2,039,606	+				-0.8
2,039,607	-				+0.0
2,039,628	+				+0.1
2,039,628	+				+0.7
2,039,628	+				+0.4
2,039,629	-				+0.7
2,039,629	-				-0.4
2,039,653	+				-0.5
2,039,707	-		RR42_RS29730	0.14	+0.7
2,039,736	+		RR42_RS29730	0.26	-0.5
2,039,737	-		RR42_RS29730	0.26	-0.7
2,039,737	-		RR42_RS29730	0.26	+0.5
2,039,755	-		RR42_RS29730	0.34	-1.0
2,039,778	-		RR42_RS29730	0.43	+0.2
2,039,956	+				-0.3
2,039,957	-				-0.4
2,039,961	+				+0.7
2,039,972	-				+1.1
2,039,994	-				+1.2
2,040,060	+		RR42_RS29735	0.28	+0.5
2,040,061	-		RR42_RS29735	0.29	-0.5
2,040,110	-		RR42_RS29735	0.53	+0.9
2,040,110	-		RR42_RS29735	0.53	-2.0
2,040,110	-		RR42_RS29735	0.53	-0.5
2,040,115	+		RR42_RS29735	0.56	+0.5
2,040,116	-		RR42_RS29735	0.56	+0.5
2,040,122	-		RR42_RS29735	0.59	-1.8
2,040,122	-		RR42_RS29735	0.59	+1.1
2,040,122	-		RR42_RS29735	0.59	+0.5
2,040,122	-		RR42_RS29735	0.59	+0.2
2,040,126	+		RR42_RS29735	0.61	-1.3
2,040,127	-		RR42_RS29735	0.62	-0.1
2,040,127	-		RR42_RS29735	0.62	-1.9
2,040,141	+		RR42_RS29735	0.69	-1.3
2,040,142	-		RR42_RS29735	0.69	+1.2
2,040,191	+				-1.1
2,040,249	-				+0.2
2,040,277	-				-2.5
2,040,277	-				+0.6
2,040,374	+				+0.2
2,040,375	-				-0.8
2,040,375	-				+0.2
2,040,385	+				-0.4
2,040,385	+				-0.7
2,040,386	-				-0.6
2,040,386	-				-1.6
2,040,386	-				+0.6
2,040,403	+				-0.6