Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28515

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,752,417	-		RR42_RS28505	0.74	+0.5
1,752,542	+				-0.0
1,752,542	+				-0.2
1,752,542	+				-1.1
1,752,543	-				+0.5
1,752,580	-				+1.3
1,752,627	-				-1.5
1,752,883	-		RR42_RS28510	0.35	-0.1
1,753,048	-		RR42_RS28510	0.60	+0.3
1,753,057	-		RR42_RS28510	0.62	-0.5
1,753,142	-		RR42_RS28510	0.75	-2.0
1,753,143	+		RR42_RS28510	0.75	-0.2
1,753,224	+		RR42_RS28510	0.88	-0.7
1,753,224	+		RR42_RS28510	0.88	+0.7
1,753,224	+		RR42_RS28510	0.88	+0.6
1,753,224	+		RR42_RS28510	0.88	+0.7
1,753,225	-		RR42_RS28510	0.88	-0.1
1,753,225	-		RR42_RS28510	0.88	-0.2
1,753,253	+				-2.1
1,753,281	+				-0.3
1,753,707	+		RR42_RS28515	0.36	-0.5
1,753,790	+		RR42_RS28515	0.45	+1.3
1,753,790	+		RR42_RS28515	0.45	+0.5
1,753,791	-		RR42_RS28515	0.46	+0.2
1,753,791	-		RR42_RS28515	0.46	+0.8
1,754,017	-		RR42_RS28515	0.72	+0.2
1,754,028	+		RR42_RS28515	0.73	-0.5
1,754,028	+		RR42_RS28515	0.73	+0.2
1,754,128	+		RR42_RS28515	0.85	+1.2
1,754,214	+				+0.5
1,754,214	+				+0.3
1,754,214	+				+0.1
1,754,215	-				+0.6
1,754,215	-				-1.8
1,754,327	+				+0.8
1,754,348	+				-1.5
1,754,349	-				+0.0
1,754,372	+				+0.8
1,754,372	+				-0.8
1,754,373	-				-1.6
1,754,702	+		RR42_RS28520	0.80	+0.5
1,754,746	+				+0.4
1,754,905	+				-2.1
1,754,905	+				-0.1
1,755,002	+				-1.0
1,755,002	+				-0.5
1,755,002	+				-0.2
1,755,002	+				-0.2
1,755,050	+				+0.7
1,755,051	-				-0.9
1,755,119	+				+0.1
1,755,120	-				+0.0
1,755,131	+				+1.1
1,755,132	-				-0.8
1,755,132	-				-1.2
1,755,175	+				+0.8
1,755,176	-				-0.2
1,755,176	-				+0.1
1,755,223	+				+0.5