Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27920

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,626,624	-				-0.2
1,626,762	-				+0.2
1,626,776	+				-0.3
1,626,781	-				-0.2
1,626,875	+				-1.6
1,626,876	-				+0.3
1,626,879	+				+1.0
1,626,971	-				+0.3
1,627,055	-				-2.7
1,627,068	-				+2.2
1,627,096	+				-0.1
1,627,153	+				+0.1
1,627,242	+				-0.5
1,627,242	+				+0.3
1,627,282	-				-0.5
1,627,304	+				+1.3
1,627,305	-				-0.3
1,627,371	+				-0.0
1,627,556	-				-0.4
1,627,571	+				-0.8
1,627,571	+				+0.8
1,627,641	+				-0.2
1,627,863	+		RR42_RS27920	0.48	+0.3
1,627,864	-		RR42_RS27920	0.48	+0.9
1,627,864	-		RR42_RS27920	0.48	+0.3
1,627,925	+		RR42_RS27920	0.59	+0.4
1,627,925	+		RR42_RS27920	0.59	-0.7
1,627,926	-		RR42_RS27920	0.59	+0.1
1,628,005	+		RR42_RS27920	0.73	-0.0
1,628,006	-		RR42_RS27920	0.73	-0.9
1,628,009	-		RR42_RS27920	0.74	-0.4
1,628,009	-		RR42_RS27920	0.74	-0.1
1,628,013	+		RR42_RS27920	0.74	+1.2
1,628,013	+		RR42_RS27920	0.74	+0.4
1,628,013	+		RR42_RS27920	0.74	+1.3
1,628,013	+		RR42_RS27920	0.74	+0.5
1,628,014	-		RR42_RS27920	0.74	+0.6
1,628,020	-		RR42_RS27920	0.75	+0.2
1,628,151	-				+0.7
1,628,154	-				-0.4
1,628,154	-				+0.9
1,628,180	+				-0.7
1,628,231	+				+0.7
1,628,254	+		RR42_RS27925	0.11	+0.7
1,628,254	+		RR42_RS27925	0.11	-1.7
1,628,255	-		RR42_RS27925	0.11	-1.8
1,628,358	+		RR42_RS27925	0.35	+0.3
1,628,359	-		RR42_RS27925	0.35	+0.1
1,628,390	+		RR42_RS27925	0.43	-0.5
1,628,391	-		RR42_RS27925	0.43	-0.7
1,628,391	-		RR42_RS27925	0.43	+0.0
1,628,487	+		RR42_RS27925	0.65	-0.5
1,628,488	-		RR42_RS27925	0.65	+0.0
1,628,679	+				+0.0
1,628,786	+				-1.3
1,628,787	-				-0.4
1,628,787	-				+0.6
1,628,909	+		RR42_RS27930	0.12	-0.2
1,628,910	-		RR42_RS27930	0.12	+0.3
1,628,910	-		RR42_RS27930	0.12	+0.6
1,629,046	-		RR42_RS27930	0.23	+0.6
1,629,075	-		RR42_RS27930	0.26	+0.4