Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27570

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,550,095	+		RR42_RS27560	0.61	+0.0
1,550,096	-		RR42_RS27560	0.61	-0.2
1,550,420	-				-0.3
1,550,420	-				-1.2
1,550,420	-				+0.4
1,550,525	-				-1.0
1,550,526	+				+1.4
1,550,545	+				-0.1
1,550,545	+				+0.9
1,550,546	-				+0.1
1,550,546	-				-0.6
1,550,551	-				-0.2
1,550,551	-				+0.3
1,550,582	-				-1.1
1,550,582	-				+1.0
1,550,582	-				+0.7
1,550,619	+				+0.3
1,550,620	-				+2.8
1,550,625	+				-0.9
1,550,626	-				-0.5
1,550,626	-				-0.1
1,550,936	-		RR42_RS27565	0.62	-1.3
1,551,143	+				-0.7
1,551,144	-				-0.0
1,551,144	-				-0.9
1,551,146	+				+0.4
1,551,146	+				-1.0
1,551,147	-				+0.5
1,551,147	-				+0.4
1,551,164	+		RR42_RS27570	0.10	-0.8
1,551,165	-		RR42_RS27570	0.11	+0.9
1,551,165	-		RR42_RS27570	0.11	-0.9
1,551,261	-		RR42_RS27570	0.24	-1.8
1,551,783	-				+0.3
1,551,797	-				+0.3
1,551,797	-				-0.3
1,551,797	-				+0.2
1,551,854	-				+0.2
1,552,087	+				+0.3
1,552,105	-				+1.5
1,552,235	+		RR42_RS27575	0.12	-0.0
1,552,236	-		RR42_RS27575	0.12	+0.7
1,552,367	+		RR42_RS27575	0.23	+0.4
1,552,367	+		RR42_RS27575	0.23	-1.3
1,552,367	+		RR42_RS27575	0.23	-1.0
1,552,367	+		RR42_RS27575	0.23	-1.0
1,552,368	-		RR42_RS27575	0.23	+0.5
1,552,554	+		RR42_RS27575	0.39	-0.7
1,552,554	+		RR42_RS27575	0.39	+1.1
1,552,554	+		RR42_RS27575	0.39	+0.4
1,552,554	+		RR42_RS27575	0.39	+0.3
1,552,554	+		RR42_RS27575	0.39	+0.7
1,552,554	+		RR42_RS27575	0.39	+0.2
1,552,554	+		RR42_RS27575	0.39	+0.5
1,552,554	+		RR42_RS27575	0.39	-0.2
1,552,555	-		RR42_RS27575	0.40	-0.6
1,552,753	+		RR42_RS27575	0.57	+0.2
1,552,754	-		RR42_RS27575	0.57	+0.1
1,552,757	+		RR42_RS27575	0.57	+0.6
1,552,757	+		RR42_RS27575	0.57	-0.3
1,552,758	-		RR42_RS27575	0.57	-0.7
1,552,766	+		RR42_RS27575	0.58	-0.1
1,552,767	-		RR42_RS27575	0.58	+0.3
1,552,767	-		RR42_RS27575	0.58	-0.8
1,552,767	-		RR42_RS27575	0.58	+0.8