Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27230

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,460,493	+		RR42_RS27225	0.55	+0.2
1,460,494	-		RR42_RS27225	0.55	+0.4
1,460,581	-		RR42_RS27225	0.62	-0.5
1,460,631	+		RR42_RS27225	0.66	-0.2
1,460,631	+		RR42_RS27225	0.66	+0.9
1,460,632	-		RR42_RS27225	0.67	+0.2
1,460,632	-		RR42_RS27225	0.67	-0.1
1,460,926	-				-0.0
1,460,949	+				-1.3
1,461,283	+				+0.4
1,461,634	+		RR42_RS27230	0.37	-1.9
1,461,634	+		RR42_RS27230	0.37	-1.3
1,461,758	-		RR42_RS27230	0.67	-0.5
1,461,877	+				-0.1
1,461,878	-				+0.1
1,461,878	-				-0.3
1,461,878	-				+2.7
1,461,893	+				+1.2
1,461,894	-				+0.5
1,461,894	-				+0.0
1,461,896	+				-1.3
1,462,106	-		RR42_RS27235	0.18	-0.4
1,462,232	+		RR42_RS27235	0.29	+1.2
1,462,233	-		RR42_RS27235	0.29	-1.9
1,462,233	-		RR42_RS27235	0.29	-0.9
1,462,486	+		RR42_RS27235	0.51	-0.3
1,462,556	-		RR42_RS27235	0.57	-0.2
1,462,602	+		RR42_RS27235	0.61	-0.4
1,462,602	+		RR42_RS27235	0.61	+1.8
1,462,602	+		RR42_RS27235	0.61	+0.2
1,462,603	-		RR42_RS27235	0.61	+0.3
1,462,603	-		RR42_RS27235	0.61	+0.5
1,462,806	+		RR42_RS27235	0.78	-0.3
1,462,807	-		RR42_RS27235	0.78	-0.9
1,462,809	-		RR42_RS27235	0.78	-0.1
1,462,809	-		RR42_RS27235	0.78	-0.4
1,462,809	-		RR42_RS27235	0.78	+0.7
1,462,809	-		RR42_RS27235	0.78	+0.6
1,462,862	+		RR42_RS27235	0.83	-0.7
1,462,863	-		RR42_RS27235	0.83	+0.8
1,462,872	+		RR42_RS27235	0.84	+1.6