Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26545

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,310,309	+		RR42_RS26540	0.17	+1.2
1,311,011	+				+0.1
1,311,012	-				+0.2
1,311,012	-				-0.2
1,311,012	-				-0.5
1,311,012	-				-0.5
1,311,012	-				+0.8
1,311,019	+				+0.1
1,311,020	-				-0.3
1,311,020	-				-2.0
1,311,043	+				-0.2
1,311,412	-		RR42_RS26545	0.24	+1.0
1,311,472	+		RR42_RS26545	0.30	+0.3
1,311,472	+		RR42_RS26545	0.30	+1.1
1,311,514	+		RR42_RS26545	0.35	-0.4
1,311,514	+		RR42_RS26545	0.35	-0.3
1,311,515	-		RR42_RS26545	0.35	+0.5
1,311,589	+		RR42_RS26545	0.42	-0.1
1,311,646	+		RR42_RS26545	0.48	-0.5
1,311,646	+		RR42_RS26545	0.48	+0.6
1,311,647	-		RR42_RS26545	0.48	-1.2
1,311,647	-		RR42_RS26545	0.48	+0.2
1,311,647	-		RR42_RS26545	0.48	+2.8
1,312,153	+				+0.0
1,312,153	+				-0.3
1,312,154	-				+0.4
1,312,154	-				+0.2
1,312,154	-				+0.2
1,312,324	+		RR42_RS26550	0.17	-0.2
1,312,324	+		RR42_RS26550	0.17	+0.4
1,312,325	-		RR42_RS26550	0.18	-0.9
1,312,325	-		RR42_RS26550	0.18	+0.8
1,312,325	-		RR42_RS26550	0.18	-0.0
1,312,325	-		RR42_RS26550	0.18	+0.2
1,312,325	-		RR42_RS26550	0.18	-0.2
1,312,359	+		RR42_RS26550	0.21	+1.3
1,312,360	-		RR42_RS26550	0.21	-0.1
1,312,507	+		RR42_RS26550	0.37	-0.7
1,312,579	+		RR42_RS26550	0.44	+0.3
1,312,579	+		RR42_RS26550	0.44	-2.0
1,312,579	+		RR42_RS26550	0.44	-0.7
1,312,579	+		RR42_RS26550	0.44	-0.5
1,312,580	-		RR42_RS26550	0.45	+0.9
1,312,580	-		RR42_RS26550	0.45	+2.6
1,312,618	-		RR42_RS26550	0.49	-0.3
1,312,618	-		RR42_RS26550	0.49	-0.0
1,312,630	+		RR42_RS26550	0.50	+0.7
1,312,806	+		RR42_RS26550	0.68	-0.5
1,312,806	+		RR42_RS26550	0.68	+0.8
1,312,806	+		RR42_RS26550	0.68	+0.6
1,312,814	-		RR42_RS26550	0.69	+0.5
1,312,888	+		RR42_RS26550	0.77	+1.0
1,312,888	+		RR42_RS26550	0.77	+1.5
1,312,888	+		RR42_RS26550	0.77	-1.0
1,312,889	-		RR42_RS26550	0.77	+0.9
1,312,889	-		RR42_RS26550	0.77	+0.6