Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26170

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,227,610	+		RR42_RS26165	0.64	-1.7
1,227,610	+		RR42_RS26165	0.64	-0.5
1,227,610	+		RR42_RS26165	0.64	-1.3
1,227,610	+		RR42_RS26165	0.64	-0.1
1,227,611	-		RR42_RS26165	0.64	-0.4
1,227,611	-		RR42_RS26165	0.64	+0.7
1,227,611	-		RR42_RS26165	0.64	-0.5
1,227,611	-		RR42_RS26165	0.64	-0.2
1,227,611	-		RR42_RS26165	0.64	+1.4
1,227,611	-		RR42_RS26165	0.64	+0.7
1,227,611	-		RR42_RS26165	0.64	+1.4
1,227,658	+		RR42_RS26165	0.67	+0.1
1,227,658	+		RR42_RS26165	0.67	-0.8
1,227,658	+		RR42_RS26165	0.67	+0.0
1,227,658	+		RR42_RS26165	0.67	+0.4
1,227,658	+		RR42_RS26165	0.67	+1.0
1,227,659	-		RR42_RS26165	0.68	-0.7
1,227,776	-		RR42_RS26165	0.76	-1.0
1,227,776	-		RR42_RS26165	0.76	+0.4
1,227,776	-		RR42_RS26165	0.76	+0.7
1,227,808	+		RR42_RS26165	0.78	-1.5
1,227,808	+		RR42_RS26165	0.78	-0.6
1,227,850	+		RR42_RS26165	0.81	-1.1
1,227,850	+		RR42_RS26165	0.81	-1.1
1,227,850	+		RR42_RS26165	0.81	-1.0
1,227,851	-		RR42_RS26165	0.81	+0.8
1,228,076	+				+0.8
1,228,077	-				-0.3
1,228,220	+				-3.6
1,228,270	+				-0.4
1,228,270	+				+0.8
1,228,270	+				-1.8
1,228,271	-				+1.2
1,228,271	-				-0.1
1,228,271	-				+0.8
1,228,351	+				-0.9
1,228,351	+				+0.1
1,228,351	+				-1.1
1,228,351	+				-0.2
1,228,352	-				+0.5
1,228,352	-				+0.5
1,228,437	+				-0.9
1,228,438	-				+0.0
1,228,438	-				-0.3
1,228,518	+				-0.2
1,228,519	-				+1.4
1,228,519	-				+0.6
1,228,519	-				+1.0
1,228,524	+				-0.0
1,228,524	+				+0.3
1,228,613	-				+1.1
1,228,617	-				+0.5
1,228,644	+				+0.1
1,228,645	-				+1.2
1,228,645	-				+0.9
1,228,667	+				-2.2
1,228,667	+				+0.9
1,228,668	-				+1.0
1,228,794	+		RR42_RS26170	0.19	+0.5
1,229,012	+		RR42_RS26170	0.40	+0.5
1,229,012	+		RR42_RS26170	0.40	-0.6
1,229,144	+		RR42_RS26170	0.53	+0.5
1,229,145	-		RR42_RS26170	0.53	+1.1
1,229,145	-		RR42_RS26170	0.53	+0.8
1,229,145	-		RR42_RS26170	0.53	-0.2
1,229,198	+		RR42_RS26170	0.58	+1.1
1,229,198	+		RR42_RS26170	0.58	+1.2
1,229,199	-		RR42_RS26170	0.58	+1.4
1,229,199	-		RR42_RS26170	0.58	-1.8
1,229,213	+		RR42_RS26170	0.59	+0.3
1,229,213	+		RR42_RS26170	0.59	+1.6
1,229,630	+				+0.5
1,230,027	+		RR42_RS26175	0.15	+0.4
1,230,028	-		RR42_RS26175	0.15	-0.8
1,230,028	-		RR42_RS26175	0.15	+0.1
1,230,243	+		RR42_RS26175	0.27	+0.3
1,230,244	-		RR42_RS26175	0.27	+0.3
1,230,426	+		RR42_RS26175	0.36	-0.5
1,230,483	+		RR42_RS26175	0.39	-0.4
1,230,483	+		RR42_RS26175	0.39	-0.1
1,230,484	-		RR42_RS26175	0.39	+0.1
1,230,484	-		RR42_RS26175	0.39	-1.6
1,230,501	+		RR42_RS26175	0.40	-0.1
1,230,604	-		RR42_RS26175	0.46	-0.7