Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25930

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,156,608	+		RR42_RS25925	0.29	-0.4
1,156,609	-		RR42_RS25925	0.29	+1.4
1,156,609	-		RR42_RS25925	0.29	+0.4
1,156,610	+		RR42_RS25925	0.30	+0.2
1,156,610	+		RR42_RS25925	0.30	+0.6
1,156,610	+		RR42_RS25925	0.30	+0.6
1,156,611	-		RR42_RS25925	0.30	-2.1
1,156,611	-		RR42_RS25925	0.30	-0.6
1,156,611	-		RR42_RS25925	0.30	+0.1
1,156,611	-		RR42_RS25925	0.30	-0.0
1,156,611	-		RR42_RS25925	0.30	+0.2
1,156,634	-		RR42_RS25925	0.33	-0.3
1,156,810	-		RR42_RS25925	0.59	+0.1
1,156,810	-		RR42_RS25925	0.59	-0.1
1,156,810	-		RR42_RS25925	0.59	-0.8
1,156,953	+		RR42_RS25925	0.79	+0.1
1,156,953	+		RR42_RS25925	0.79	+1.4
1,156,954	-		RR42_RS25925	0.80	+0.3
1,156,954	-		RR42_RS25925	0.80	+0.9
1,156,954	-		RR42_RS25925	0.80	+0.2
1,156,954	-		RR42_RS25925	0.80	+1.4
1,157,014	-		RR42_RS25925	0.88	-0.1
1,157,014	-		RR42_RS25925	0.88	-0.3
1,157,019	+		RR42_RS25925	0.89	+0.9
1,157,020	-		RR42_RS25925	0.89	+0.6
1,157,139	+				-1.6
1,157,145	+				-0.6
1,157,145	+				-0.4
1,157,145	+				+0.6
1,157,145	+				+0.1
1,157,145	+				-0.3
1,157,146	-				-0.7
1,157,452	+				-0.5
1,157,452	+				+0.5
1,157,452	+				-0.2
1,157,453	-				-0.6
1,157,453	-				+0.2
1,157,870	+		RR42_RS25930	0.33	+0.3
1,157,870	+		RR42_RS25930	0.33	-1.7
1,157,874	+		RR42_RS25930	0.33	-1.2
1,157,874	+		RR42_RS25930	0.33	+0.4
1,158,000	+		RR42_RS25930	0.43	-0.7
1,158,003	+		RR42_RS25930	0.43	-0.6
1,158,003	+		RR42_RS25930	0.43	-0.1
1,158,003	+		RR42_RS25930	0.43	-1.0
1,158,003	+		RR42_RS25930	0.43	-0.7
1,158,013	-		RR42_RS25930	0.44	-1.1
1,158,013	-		RR42_RS25930	0.44	-1.2
1,158,103	-		RR42_RS25930	0.51	-0.8
1,158,264	+		RR42_RS25930	0.64	+0.2
1,158,264	+		RR42_RS25930	0.64	+0.1
1,158,264	+		RR42_RS25930	0.64	+0.9
1,158,803	-				+0.3
1,158,878	+				-0.3
1,158,878	+				+1.9
1,158,882	+				-0.1
1,158,882	+				+0.2
1,159,375	-		RR42_RS25935	0.25	+0.1
1,159,375	-		RR42_RS25935	0.25	-0.8