Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25470

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,060,518	+		RR42_RS25465	0.53	-0.1
1,060,518	+		RR42_RS25465	0.53	-0.1
1,060,519	-		RR42_RS25465	0.53	+0.3
1,060,519	-		RR42_RS25465	0.53	-0.9
1,060,519	-		RR42_RS25465	0.53	-0.8
1,060,533	-		RR42_RS25465	0.54	-0.2
1,060,566	-		RR42_RS25465	0.56	+1.8
1,060,613	+		RR42_RS25465	0.59	+0.0
1,060,680	+		RR42_RS25465	0.63	+1.9
1,060,681	-		RR42_RS25465	0.63	+0.9
1,060,707	-		RR42_RS25465	0.65	+0.5
1,060,743	+		RR42_RS25465	0.67	-0.5
1,060,745	+		RR42_RS25465	0.67	-0.7
1,060,746	-		RR42_RS25465	0.67	-0.5
1,060,824	-		RR42_RS25465	0.72	+0.9
1,060,965	+		RR42_RS25465	0.80	+0.5
1,060,966	-		RR42_RS25465	0.80	+0.3
1,060,966	-		RR42_RS25465	0.80	+1.4
1,060,966	-		RR42_RS25465	0.80	+0.5
1,060,967	+		RR42_RS25465	0.80	+1.1
1,060,968	-		RR42_RS25465	0.81	-0.9
1,061,012	-		RR42_RS25465	0.83	+0.0
1,061,051	+		RR42_RS25465	0.86	-0.3
1,061,085	+		RR42_RS25465	0.88	-0.2
1,061,157	-				+0.5
1,061,160	+				+1.8
1,061,160	+				-0.7
1,061,161	-				-1.4
1,061,161	-				-0.3
1,061,172	+				+1.4
1,061,172	+				-2.3
1,061,247	-				+0.1
1,061,247	-				-0.2
1,061,655	+		RR42_RS25470	0.42	-1.3
1,061,844	-		RR42_RS25470	0.66	-1.2
1,062,042	+				-0.9
1,062,047	-				+0.3
1,062,103	-				-0.9
1,062,113	+				+0.4
1,062,113	+				-0.6
1,062,145	-				+0.5
1,062,351	+		RR42_RS25475	0.26	+0.4
1,062,351	+		RR42_RS25475	0.26	-2.2
1,062,351	+		RR42_RS25475	0.26	-0.1
1,062,351	+		RR42_RS25475	0.26	+0.2
1,062,352	-		RR42_RS25475	0.26	+0.5
1,062,457	-		RR42_RS25475	0.38	+1.1
1,062,632	+		RR42_RS25475	0.57	-0.1
1,062,684	+		RR42_RS25475	0.63	+0.9
1,062,685	-		RR42_RS25475	0.63	-0.1
1,062,742	-		RR42_RS25475	0.69	+1.9
1,062,894	+		RR42_RS25475	0.86	-0.4
1,062,894	+		RR42_RS25475	0.86	+0.1
1,063,005	+				+0.5
1,063,005	+				+0.1
1,063,005	+				+0.6
1,063,006	-				+0.2
1,063,006	-				-0.3