Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20775

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
4,508,891	+		RR42_RS20770	0.34	-0.7
4,508,968	+		RR42_RS20770	0.47	-0.8
4,508,968	+		RR42_RS20770	0.47	-1.0
4,508,968	+		RR42_RS20770	0.47	+0.0
4,508,968	+		RR42_RS20770	0.47	-0.4
4,508,968	+		RR42_RS20770	0.47	-0.2
4,508,968	+		RR42_RS20770	0.47	+0.4
4,508,969	-		RR42_RS20770	0.47	-1.1
4,508,969	-		RR42_RS20770	0.47	+0.4
4,508,969	-		RR42_RS20770	0.47	-0.3
4,508,980	+		RR42_RS20770	0.49	+0.1
4,509,264	-				-0.6
4,509,292	+				-0.1
4,509,298	+				+0.0
4,509,521	+				-0.9
4,509,521	+				+1.4
4,509,521	+				+0.4
4,509,522	-				-0.6
4,509,522	-				+0.8
4,509,954	+		RR42_RS20775	0.89	-1.7
4,509,977	+				+0.2
4,510,031	+				+1.6
4,510,118	+				-0.3
4,510,118	+				+0.1
4,510,118	+				+0.5
4,510,118	+				-0.0
4,510,119	-				-0.6
4,510,119	-				+0.2
4,510,119	-				+0.1
4,510,237	+		RR42_RS20780	0.10	+0.4
4,510,238	-		RR42_RS20780	0.10	-0.3
4,510,409	+		RR42_RS20780	0.24	+0.0
4,510,409	+		RR42_RS20780	0.24	-0.2
4,510,409	+		RR42_RS20780	0.24	+0.1
4,510,409	+		RR42_RS20780	0.24	+0.0
4,510,409	+		RR42_RS20780	0.24	+0.8
4,510,410	-		RR42_RS20780	0.24	-0.2
4,510,419	-		RR42_RS20780	0.25	-0.0
4,510,419	-		RR42_RS20780	0.25	+0.4
4,510,424	+		RR42_RS20780	0.26	-1.1
4,510,424	+		RR42_RS20780	0.26	-0.3
4,510,424	+		RR42_RS20780	0.26	-0.0
4,510,425	-		RR42_RS20780	0.26	+0.7
4,510,425	-		RR42_RS20780	0.26	-0.4
4,510,425	-		RR42_RS20780	0.26	+0.4
4,510,425	-		RR42_RS20780	0.26	-0.9
4,510,425	-		RR42_RS20780	0.26	+0.2
4,510,425	-		RR42_RS20780	0.26	-0.4
4,510,425	-		RR42_RS20780	0.26	-0.2
4,510,425	-		RR42_RS20780	0.26	-2.0
4,510,425	-		RR42_RS20780	0.26	+0.2
4,510,490	+		RR42_RS20780	0.31	-0.6
4,510,490	+		RR42_RS20780	0.31	+0.2
4,510,491	-		RR42_RS20780	0.31	-0.6
4,510,538	+		RR42_RS20780	0.35	-0.6
4,510,539	-		RR42_RS20780	0.35	+0.4
4,510,539	-		RR42_RS20780	0.35	-1.9
4,510,847	+		RR42_RS20780	0.61	-0.6
4,510,937	+		RR42_RS20780	0.68	-0.8
4,510,937	+		RR42_RS20780	0.68	-0.4
4,510,938	-		RR42_RS20780	0.68	+0.0
4,510,938	-		RR42_RS20780	0.68	+1.1
4,510,938	-		RR42_RS20780	0.68	-0.4
4,510,938	-		RR42_RS20780	0.68	+0.3