Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20650

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
4,482,444	-				-1.5
4,482,475	+				-0.6
4,482,475	+				-1.2
4,482,476	-				-1.0
4,482,476	-				-0.9
4,482,491	-				-2.2
4,482,689	-				-3.0
4,482,704	+				-0.4
4,482,704	+				-0.8
4,482,705	-				-1.9
4,482,705	-				-1.1
4,482,705	-				-2.1
4,482,707	+				+0.0
4,482,707	+				-1.5
4,482,881	+		RR42_RS20650	0.13	-0.6
4,482,881	+		RR42_RS20650	0.13	-2.7
4,482,881	+		RR42_RS20650	0.13	-0.9
4,482,882	-		RR42_RS20650	0.13	-1.2
4,482,882	-		RR42_RS20650	0.13	-0.0
4,482,882	-		RR42_RS20650	0.13	+0.3
4,482,882	-		RR42_RS20650	0.13	-0.1
4,482,882	-		RR42_RS20650	0.13	+0.1
4,482,882	-		RR42_RS20650	0.13	-1.4
4,482,944	+		RR42_RS20650	0.15	-0.5
4,482,944	+		RR42_RS20650	0.15	-1.6
4,482,944	+		RR42_RS20650	0.15	-0.6
4,482,944	+		RR42_RS20650	0.15	-1.7
4,482,944	+		RR42_RS20650	0.15	-1.4
4,482,945	-		RR42_RS20650	0.15	-0.2
4,483,019	+		RR42_RS20650	0.17	-1.9
4,483,020	-		RR42_RS20650	0.17	-0.2
4,483,020	-		RR42_RS20650	0.17	-1.6
4,483,178	-		RR42_RS20650	0.22	-1.9
4,483,299	-		RR42_RS20650	0.26	-2.4
4,483,442	+		RR42_RS20650	0.31	-1.1
4,483,442	+		RR42_RS20650	0.31	-2.1
4,483,443	-		RR42_RS20650	0.31	-0.6
4,483,443	-		RR42_RS20650	0.31	-1.5
4,483,443	-		RR42_RS20650	0.31	-2.4
4,483,541	+		RR42_RS20650	0.34	-1.5
4,483,542	-		RR42_RS20650	0.34	-1.8
4,483,542	-		RR42_RS20650	0.34	-0.6
4,483,811	-		RR42_RS20650	0.42	-1.5
4,483,811	-		RR42_RS20650	0.42	-0.7
4,483,811	-		RR42_RS20650	0.42	-2.2
4,483,875	-		RR42_RS20650	0.44	-0.2
4,484,093	+		RR42_RS20650	0.51	+0.4
4,484,105	+		RR42_RS20650	0.52	-1.2
4,484,183	+		RR42_RS20650	0.54	-2.3
4,484,184	-		RR42_RS20650	0.54	+0.0
4,484,231	-		RR42_RS20650	0.56	-2.0
4,484,261	+		RR42_RS20650	0.57	-1.2
4,484,261	+		RR42_RS20650	0.57	-0.5
4,484,261	+		RR42_RS20650	0.57	-2.6
4,484,262	-		RR42_RS20650	0.57	-1.2
4,484,264	+		RR42_RS20650	0.57	-0.9
4,484,264	+		RR42_RS20650	0.57	-1.9
4,484,704	+		RR42_RS20650	0.71	-0.5
4,484,741	+		RR42_RS20650	0.72	-1.8
4,484,741	+		RR42_RS20650	0.72	-2.9
4,484,760	-		RR42_RS20650	0.72	-2.3
4,484,760	-		RR42_RS20650	0.72	+0.0
4,484,760	-		RR42_RS20650	0.72	-1.4
4,484,760	-		RR42_RS20650	0.72	-2.7
4,484,760	-		RR42_RS20650	0.72	-0.6
4,484,924	+		RR42_RS20650	0.78	-1.0
4,484,924	+		RR42_RS20650	0.78	+1.0
4,484,924	+		RR42_RS20650	0.78	-0.9
4,484,925	-		RR42_RS20650	0.78	-0.6
4,485,060	-		RR42_RS20650	0.82	-2.1
4,485,099	-		RR42_RS20650	0.83	-0.5
4,485,246	-		RR42_RS20650	0.88	-1.4
4,485,246	-		RR42_RS20650	0.88	+1.0
4,485,355	+				-3.1
4,485,355	+				-1.3
4,485,356	-				-0.6
4,485,356	-				-0.9
4,485,478	+				-1.8
4,485,699	+				-1.6
4,485,700	-				-2.3
4,486,017	+		RR42_RS20655	0.26	-1.6
4,486,018	-		RR42_RS20655	0.26	-1.2
4,486,030	-		RR42_RS20655	0.27	-1.6
4,486,117	-		RR42_RS20655	0.33	-0.6
4,486,117	-		RR42_RS20655	0.33	-3.1
4,486,183	-		RR42_RS20655	0.37	+0.2
4,486,183	-		RR42_RS20655	0.37	-1.2
4,486,183	-		RR42_RS20655	0.37	-2.4
4,486,183	-		RR42_RS20655	0.37	-2.1
4,486,183	-		RR42_RS20655	0.37	-0.6
4,486,212	+		RR42_RS20655	0.39	-1.3
4,486,562	+		RR42_RS20655	0.63	+0.3