Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20310

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
4,394,205	+		RR42_RS20305	0.71	-1.2
4,394,205	+		RR42_RS20305	0.71	+0.4
4,394,206	-		RR42_RS20305	0.71	-0.5
4,394,246	+		RR42_RS20305	0.73	+0.8
4,394,366	-		RR42_RS20305	0.78	+0.2
4,394,366	-		RR42_RS20305	0.78	+1.4
4,394,366	-		RR42_RS20305	0.78	-1.9
4,394,366	-		RR42_RS20305	0.78	-1.5
4,394,462	+		RR42_RS20305	0.82	+0.1
4,394,666	+				-0.7
4,394,955	+				-0.2
4,394,955	+				-2.2
4,394,956	-				+1.6
4,394,956	-				-1.8
4,394,956	-				+0.2
4,395,070	+				+0.3
4,395,153	+				-0.8
4,395,154	-				-0.0
4,395,296	+		RR42_RS20310	0.58	+1.2
4,395,455	+				-0.1
4,395,510	+				-0.7
4,395,588	-		RR42_RS20315	0.18	-0.1
4,395,629	+		RR42_RS20315	0.24	+0.1
4,395,629	+		RR42_RS20315	0.24	+0.5
4,395,629	+		RR42_RS20315	0.24	-0.2
4,395,630	-		RR42_RS20315	0.24	+1.2
4,395,630	-		RR42_RS20315	0.24	-1.1
4,395,755	+		RR42_RS20315	0.41	-0.9
4,395,756	-		RR42_RS20315	0.41	+1.2
4,395,756	-		RR42_RS20315	0.41	+1.3
4,395,756	-		RR42_RS20315	0.41	-1.9
4,395,776	+		RR42_RS20315	0.44	-0.0
4,395,776	+		RR42_RS20315	0.44	+0.2
4,395,776	+		RR42_RS20315	0.44	+0.4
4,395,776	+		RR42_RS20315	0.44	-0.6
4,395,777	-		RR42_RS20315	0.44	-0.4
4,395,777	-		RR42_RS20315	0.44	+0.1
4,395,777	-		RR42_RS20315	0.44	-0.7
4,395,777	-		RR42_RS20315	0.44	-0.8
4,395,812	+		RR42_RS20315	0.49	+0.7
4,395,813	-		RR42_RS20315	0.49	-0.3
4,395,863	+		RR42_RS20315	0.56	-0.5
4,395,863	+		RR42_RS20315	0.56	-0.9
4,395,864	-		RR42_RS20315	0.56	-1.1
4,395,933	+		RR42_RS20315	0.66	-0.9
4,395,942	+		RR42_RS20315	0.67	-0.3
4,396,038	+		RR42_RS20315	0.80	+0.9
4,396,039	-		RR42_RS20315	0.80	+1.3
4,396,101	+		RR42_RS20315	0.89	-1.6
4,396,101	+		RR42_RS20315	0.89	+0.2
4,396,102	-		RR42_RS20315	0.89	+1.5
4,396,102	-		RR42_RS20315	0.89	-0.2
4,396,102	-		RR42_RS20315	0.89	+0.7
4,396,141	+				-0.4
4,396,141	+				-0.1
4,396,141	+				-1.8
4,396,142	-				-0.1
4,396,142	-				+0.2
4,396,142	-				-0.7
4,396,151	-				-1.1
4,396,151	-				-0.2
4,396,189	+				+0.8
4,396,190	-				+0.0
4,396,190	-				+0.1
4,396,190	-				+0.4
4,396,198	+				-1.7
4,396,198	+				-0.7
4,396,198	+				-0.3
4,396,198	+				+0.6
4,396,199	-				-0.1
4,396,199	-				-0.9
4,396,199	-				+0.6
4,396,209	+				+1.5
4,396,226	-				-0.0
4,396,259	+				-0.9
4,396,261	+				+0.1
4,396,264	+				+1.0
4,396,265	-				-1.2
4,396,265	-				-1.5
4,396,273	-				+0.5
4,396,346	+				-0.1
4,396,381	-				+0.4