Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20265

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
4,382,976	+				+1.4
4,382,976	+				+0.3
4,382,977	-				+0.4
4,383,226	-		RR42_RS20260	0.47	-0.6
4,383,420	+		RR42_RS20260	0.82	+0.4
4,383,420	+		RR42_RS20260	0.82	+0.3
4,383,421	-		RR42_RS20260	0.82	-1.0
4,383,582	+				+0.1
4,383,583	-				-0.1
4,383,583	-				-1.3
4,383,634	+				+1.7
4,383,635	-				+0.4
4,383,635	-				+0.0
4,383,635	-				+0.2
4,383,635	-				-0.5
4,383,639	+				-0.0
4,383,639	+				+0.3
4,383,640	-				+0.9
4,383,641	+				+1.6
4,383,642	-				+0.5
4,383,642	-				-0.7
4,383,657	+				+0.4
4,383,657	+				-0.6
4,383,699	+				+0.6
4,383,700	-				+1.0
4,383,715	+				+1.2
4,383,715	+				+1.0
4,383,716	-				+0.1
4,383,718	-				-0.4
4,383,726	+				+0.7
4,383,726	+				-0.0
4,383,727	-				+0.9
4,383,727	-				+0.4
4,383,753	+				-1.4
4,383,859	+				+0.3
4,383,860	-				-1.4
4,384,184	+		RR42_RS20265	0.38	-1.3
4,384,304	+		RR42_RS20265	0.49	+1.0
4,384,304	+		RR42_RS20265	0.49	+0.6
4,384,305	-		RR42_RS20265	0.49	+2.1
4,384,305	-		RR42_RS20265	0.49	+1.1
4,384,305	-		RR42_RS20265	0.49	+0.3
4,384,305	-		RR42_RS20265	0.49	+1.8
4,384,307	+		RR42_RS20265	0.50	-1.5
4,384,307	+		RR42_RS20265	0.50	+0.7
4,384,307	+		RR42_RS20265	0.50	-0.2
4,384,307	+		RR42_RS20265	0.50	+0.2
4,384,308	-		RR42_RS20265	0.50	+0.9
4,384,308	-		RR42_RS20265	0.50	+0.3
4,384,391	+		RR42_RS20265	0.58	+0.0
4,384,392	-		RR42_RS20265	0.58	+0.1
4,384,454	+		RR42_RS20265	0.64	-0.3
4,384,454	+		RR42_RS20265	0.64	-0.7
4,384,454	+		RR42_RS20265	0.64	-0.4
4,384,454	+		RR42_RS20265	0.64	+1.8
4,384,455	-		RR42_RS20265	0.64	+0.2
4,384,455	-		RR42_RS20265	0.64	+0.4
4,384,455	-		RR42_RS20265	0.64	+0.1
4,384,481	+		RR42_RS20265	0.67	+1.3
4,384,482	-		RR42_RS20265	0.67	+1.5
4,384,493	+		RR42_RS20265	0.68	+0.2
4,384,493	+		RR42_RS20265	0.68	+0.2
4,384,493	+		RR42_RS20265	0.68	-0.1
4,384,494	-		RR42_RS20265	0.68	+1.9
4,384,577	+		RR42_RS20265	0.76	+0.3
4,384,578	+		RR42_RS20265	0.76	+0.1
4,384,580	+		RR42_RS20265	0.76	+0.5
4,384,629	+		RR42_RS20265	0.81	+0.1
4,384,629	+		RR42_RS20265	0.81	+1.5
4,384,631	+		RR42_RS20265	0.81	+0.1
4,384,749	-				+0.8
4,384,912	+				-0.9
4,384,912	+				+0.6
4,385,185	+		RR42_RS20270	0.41	+0.9
4,385,185	+		RR42_RS20270	0.41	-0.5
4,385,186	-		RR42_RS20270	0.41	-2.0
4,385,186	-		RR42_RS20270	0.41	+1.1
4,385,216	-		RR42_RS20270	0.44	-0.1
4,385,216	-		RR42_RS20270	0.44	+0.1
4,385,326	+		RR42_RS20270	0.57	+0.1
4,385,407	+		RR42_RS20270	0.66	+1.1
4,385,407	+		RR42_RS20270	0.66	-0.3
4,385,408	-		RR42_RS20270	0.66	+0.7
4,385,408	-		RR42_RS20270	0.66	+0.2
4,385,408	-		RR42_RS20270	0.66	+0.4
4,385,408	-		RR42_RS20270	0.66	+2.1
4,385,408	-		RR42_RS20270	0.66	+0.0
4,385,411	+		RR42_RS20270	0.66	+0.7
4,385,411	+		RR42_RS20270	0.66	-1.2
4,385,412	-		RR42_RS20270	0.66	-0.9
4,385,412	-		RR42_RS20270	0.66	+0.0
4,385,412	-		RR42_RS20270	0.66	+0.6
4,385,425	+		RR42_RS20270	0.68	+0.7
4,385,425	+		RR42_RS20270	0.68	-1.0
4,385,426	-		RR42_RS20270	0.68	-0.2
4,385,426	-		RR42_RS20270	0.68	-1.4
4,385,426	-		RR42_RS20270	0.68	-1.1
4,385,506	+		RR42_RS20270	0.77	-0.9
4,385,635	+				-0.2
4,385,635	+				+0.1
4,385,635	+				+0.1
4,385,636	-				+0.1
4,385,636	-				+0.7
4,385,636	-				+0.7
4,385,665	-				+0.3
4,385,665	-				-0.2
4,385,665	-				+0.1