Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19525

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
4,215,386	-		RR42_RS19520	0.70	-0.0
4,215,647	-		RR42_RS19520	0.81	-0.8
4,215,647	-		RR42_RS19520	0.81	+0.0
4,215,763	+		RR42_RS19520	0.85	-0.9
4,215,764	-		RR42_RS19520	0.85	-1.1
4,215,764	-		RR42_RS19520	0.85	+0.4
4,215,812	-		RR42_RS19520	0.87	-1.9
4,215,818	-		RR42_RS19520	0.88	-0.1
4,215,819	+		RR42_RS19520	0.88	-0.3
4,215,819	+		RR42_RS19520	0.88	-1.4
4,215,820	-		RR42_RS19520	0.88	-1.8
4,215,820	-		RR42_RS19520	0.88	-1.1
4,215,820	-		RR42_RS19520	0.88	-1.2
4,215,820	-		RR42_RS19520	0.88	-0.8
4,215,820	-		RR42_RS19520	0.88	-1.6
4,215,855	+		RR42_RS19520	0.89	-0.6
4,215,877	-				-1.7
4,216,216	-				-0.2
4,216,217	-				-1.4
4,216,392	+		RR42_RS19525	0.17	+0.4
4,216,392	+		RR42_RS19525	0.17	-0.6
4,216,978	-		RR42_RS19525	0.55	-0.4
4,217,043	+		RR42_RS19525	0.59	-0.6
4,217,472	+		RR42_RS19525	0.87	-0.2
4,217,491	+		RR42_RS19525	0.88	-1.2
4,217,493	+		RR42_RS19525	0.88	-2.0
4,217,494	-		RR42_RS19525	0.88	-0.4
4,217,494	-		RR42_RS19525	0.88	-1.2
4,217,670	+				+0.5
4,217,670	+				-0.1
4,217,698	+				-0.9
4,217,698	+				-0.6
4,217,705	-				+0.6
4,217,783	+				-1.6
4,217,986	+		RR42_RS19530	0.24	-0.8
4,217,986	+		RR42_RS19530	0.24	+0.1
4,217,986	+		RR42_RS19530	0.24	-0.9
4,217,986	+		RR42_RS19530	0.24	-0.4
4,217,986	+		RR42_RS19530	0.24	+2.1
4,217,986	+		RR42_RS19530	0.24	-0.0
4,217,987	-		RR42_RS19530	0.24	-0.9
4,217,987	-		RR42_RS19530	0.24	-0.7
4,217,987	-		RR42_RS19530	0.24	-2.2
4,217,987	-		RR42_RS19530	0.24	-0.5
4,218,081	+		RR42_RS19530	0.32	-1.1
4,218,086	-		RR42_RS19530	0.33	-0.4
4,218,086	-		RR42_RS19530	0.33	-1.4
4,218,154	+		RR42_RS19530	0.38	-1.4
4,218,155	-		RR42_RS19530	0.38	-1.6
4,218,155	-		RR42_RS19530	0.38	-1.0
4,218,155	-		RR42_RS19530	0.38	-2.5
4,218,155	-		RR42_RS19530	0.38	-0.3
4,218,155	-		RR42_RS19530	0.38	+2.4
4,218,201	+		RR42_RS19530	0.42	-1.5
4,218,201	+		RR42_RS19530	0.42	-0.2
4,218,202	-		RR42_RS19530	0.42	-1.9
4,218,202	-		RR42_RS19530	0.42	+0.1
4,218,205	+		RR42_RS19530	0.42	-1.0
4,218,259	+		RR42_RS19530	0.47	-0.1
4,218,259	+		RR42_RS19530	0.47	-1.8
4,218,259	+		RR42_RS19530	0.47	+0.4
4,218,259	+		RR42_RS19530	0.47	-0.8
4,218,259	+		RR42_RS19530	0.47	-1.2
4,218,259	+		RR42_RS19530	0.47	-2.5
4,218,259	+		RR42_RS19530	0.47	-2.2
4,218,259	+		RR42_RS19530	0.47	-0.6
4,218,260	-		RR42_RS19530	0.47	-1.2
4,218,260	-		RR42_RS19530	0.47	-0.1
4,218,260	-		RR42_RS19530	0.47	-1.8
4,218,260	-		RR42_RS19530	0.47	+0.1
4,218,260	-		RR42_RS19530	0.47	-0.4
4,218,260	-		RR42_RS19530	0.47	-0.4
4,218,260	-		RR42_RS19530	0.47	-2.6
4,218,260	-		RR42_RS19530	0.47	-1.3
4,218,404	+		RR42_RS19530	0.59	-0.8
4,218,404	+		RR42_RS19530	0.59	-0.9
4,218,493	+		RR42_RS19530	0.66	-0.9
4,218,493	+		RR42_RS19530	0.66	-0.5
4,218,493	+		RR42_RS19530	0.66	-1.5
4,218,494	-		RR42_RS19530	0.66	-1.3
4,218,495	+		RR42_RS19530	0.66	-1.8
4,218,495	+		RR42_RS19530	0.66	-0.2
4,218,495	+		RR42_RS19530	0.66	-1.2
4,218,496	-		RR42_RS19530	0.66	-0.6