Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18945

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
4,100,960	-		RR42_RS18940	0.40	-0.1
4,100,960	-		RR42_RS18940	0.40	-0.2
4,101,224	-		RR42_RS18940	0.68	+0.5
4,101,224	-		RR42_RS18940	0.68	-0.3
4,101,303	-		RR42_RS18940	0.76	-1.5
4,101,303	-		RR42_RS18940	0.76	+0.8
4,101,303	-		RR42_RS18940	0.76	+0.4
4,101,640	-				+2.3
4,101,640	-				+0.2
4,101,640	-				-0.3
4,101,640	-				+0.4
4,101,640	-				-0.3
4,101,640	-				-0.4
4,101,640	-				+0.9
4,101,640	-				-1.7
4,101,642	-				+1.1
4,101,671	-				-1.0
4,101,671	-				+0.7
4,101,671	-				+0.3
4,101,671	-				-0.5
4,101,857	+		RR42_RS18945	0.26	-1.3
4,101,857	+		RR42_RS18945	0.26	-0.3
4,101,857	+		RR42_RS18945	0.26	-0.6
4,101,857	+		RR42_RS18945	0.26	-2.1
4,101,857	+		RR42_RS18945	0.26	-1.2
4,101,858	-		RR42_RS18945	0.26	-0.4
4,102,152	+				+0.9
4,102,152	+				-1.3
4,102,152	+				-0.3
4,102,153	-				-0.8
4,102,153	-				+0.7
4,102,311	+		RR42_RS18950	0.16	-0.8
4,102,311	+		RR42_RS18950	0.16	-0.7
4,102,311	+		RR42_RS18950	0.16	-0.5
4,102,312	-		RR42_RS18950	0.16	-0.6
4,102,312	-		RR42_RS18950	0.16	-0.2
4,102,312	-		RR42_RS18950	0.16	+0.1
4,102,312	-		RR42_RS18950	0.16	-0.2
4,102,350	+		RR42_RS18950	0.22	-1.3
4,102,351	-		RR42_RS18950	0.22	-1.3
4,102,351	-		RR42_RS18950	0.22	+0.2
4,102,351	-		RR42_RS18950	0.22	-0.8
4,102,351	-		RR42_RS18950	0.22	-0.7
4,102,464	+		RR42_RS18950	0.41	+0.7
4,102,515	+		RR42_RS18950	0.49	-0.3
4,102,515	+		RR42_RS18950	0.49	+0.6
4,102,515	+		RR42_RS18950	0.49	-0.9
4,102,515	+		RR42_RS18950	0.49	-0.3
4,102,515	+		RR42_RS18950	0.49	-0.6
4,102,515	+		RR42_RS18950	0.49	-0.9
4,102,516	-		RR42_RS18950	0.49	-1.5
4,102,516	-		RR42_RS18950	0.49	-1.3
4,102,805	-				-1.3
4,102,834	+				-0.7
4,102,835	-				+0.5
4,102,835	-				-1.8
4,102,835	-				-0.3
4,102,835	-				-0.6
4,102,845	+				-1.0
4,102,846	-				-0.9
4,102,875	+				-0.1
4,102,876	-				+0.1
4,102,876	-				+0.0
4,102,876	-				-0.0
4,102,886	+				-0.1
4,102,886	+				+0.1
4,102,886	+				-0.2
4,102,886	+				+0.5
4,102,886	+				-0.1
4,102,886	+				-1.5
4,102,886	+				-0.2
4,102,886	+				+0.2
4,102,886	+				-0.2
4,102,886	+				-0.1
4,102,886	+				+0.2
4,102,886	+				-0.2
4,102,886	+				-0.4
4,102,887	-				-0.5
4,102,887	-				+0.1
4,102,887	-				+1.5
4,102,887	-				-1.3
4,102,887	-				-0.4
4,102,887	-				-0.3
4,103,061	+				-1.0
4,103,062	-				-0.2