Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18825

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
4,081,314	-		RR42_RS18820	0.33	-1.7
4,081,314	-		RR42_RS18820	0.33	+0.3
4,081,484	+		RR42_RS18820	0.46	-0.8
4,081,484	+		RR42_RS18820	0.46	-0.5
4,081,487	+		RR42_RS18820	0.46	-0.6
4,081,683	-		RR42_RS18820	0.60	-1.7
4,081,794	-		RR42_RS18820	0.68	-1.3
4,081,900	-		RR42_RS18820	0.75	-0.5
4,081,900	-		RR42_RS18820	0.75	-0.7
4,081,908	-		RR42_RS18820	0.76	-0.3
4,081,950	-		RR42_RS18820	0.79	-1.4
4,081,950	-		RR42_RS18820	0.79	-2.8
4,081,989	-		RR42_RS18820	0.82	-0.3
4,082,003	+		RR42_RS18820	0.83	-0.8
4,082,049	-		RR42_RS18820	0.86	+1.1
4,082,049	-		RR42_RS18820	0.86	-0.7
4,082,049	-		RR42_RS18820	0.86	+2.2
4,082,148	-				+0.3
4,082,148	-				-0.5
4,082,157	-				-0.3
4,082,227	+				-0.7
4,082,317	-		RR42_RS18825	0.11	-1.3
4,082,709	+		RR42_RS18825	0.74	+0.1
4,082,754	-		RR42_RS18825	0.82	-1.3
4,082,892	+				-2.1
4,082,893	-				+1.6
4,082,911	-				-0.1
4,082,918	-				-0.7
4,082,918	-				+0.7
4,082,923	-				+1.1
4,082,923	-				+0.3
4,082,923	-				-0.3
4,082,923	-				-0.3
4,083,001	+				-0.5
4,083,002	-				-0.1
4,083,002	-				+0.4
4,083,002	-				-1.3
4,083,002	-				-0.0
4,083,002	-				+0.2
4,083,002	-				+0.4
4,083,002	-				+0.4
4,083,037	+				+0.2
4,083,038	-				-0.2
4,083,038	-				+0.0
4,083,038	-				-0.0
4,083,223	+		RR42_RS18830	0.33	-0.5
4,083,304	+		RR42_RS18830	0.52	+0.7
4,083,305	-		RR42_RS18830	0.52	-0.4
4,083,305	-		RR42_RS18830	0.52	-0.2
4,083,349	+		RR42_RS18830	0.62	-0.5
4,083,349	+		RR42_RS18830	0.62	+0.2
4,083,349	+		RR42_RS18830	0.62	-1.1
4,083,350	-		RR42_RS18830	0.62	+0.5
4,083,350	-		RR42_RS18830	0.62	+0.2
4,083,350	-		RR42_RS18830	0.62	+0.6
4,083,590	-				+0.2
4,083,602	-				-0.7
4,083,602	-				+0.1
4,083,747	+		RR42_RS18835	0.23	-1.3
4,083,748	-		RR42_RS18835	0.24	+1.0
4,083,748	-		RR42_RS18835	0.24	-0.6
4,083,748	-		RR42_RS18835	0.24	+0.3
4,083,748	-		RR42_RS18835	0.24	+0.3
4,083,748	-		RR42_RS18835	0.24	-1.7
4,083,783	+		RR42_RS18835	0.28	-1.6