Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18220

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,947,585	+		RR42_RS18215	0.29	+2.3
3,947,585	+		RR42_RS18215	0.29	-0.4
3,947,586	-		RR42_RS18215	0.29	-1.4
3,947,586	-		RR42_RS18215	0.29	+0.2
3,947,974	+		RR42_RS18215	0.61	-1.2
3,947,975	-		RR42_RS18215	0.62	+0.1
3,947,975	-		RR42_RS18215	0.62	-0.5
3,948,122	+		RR42_RS18215	0.74	+1.3
3,948,273	-		RR42_RS18215	0.87	+0.3
3,948,300	+		RR42_RS18215	0.89	-0.2
3,948,300	+		RR42_RS18215	0.89	-0.5
3,948,300	+		RR42_RS18215	0.89	-0.1
3,948,301	-		RR42_RS18215	0.89	-0.5
3,948,301	-		RR42_RS18215	0.89	-1.5
3,948,353	+				+0.7
3,948,353	+				-0.3
3,948,556	+		RR42_RS18220	0.12	-0.1
3,948,694	+		RR42_RS18220	0.26	-0.6
3,948,694	+		RR42_RS18220	0.26	-1.5
3,948,694	+		RR42_RS18220	0.26	-0.4
3,948,694	+		RR42_RS18220	0.26	-0.4
3,948,695	-		RR42_RS18220	0.27	-0.9
3,948,695	-		RR42_RS18220	0.27	+1.0
3,948,695	-		RR42_RS18220	0.27	-0.2
3,948,695	-		RR42_RS18220	0.27	-1.7
3,948,695	-		RR42_RS18220	0.27	+0.3
3,948,695	-		RR42_RS18220	0.27	-0.5
3,948,695	-		RR42_RS18220	0.27	-0.4
3,948,695	-		RR42_RS18220	0.27	-0.9
3,948,695	-		RR42_RS18220	0.27	-0.1
3,948,695	-		RR42_RS18220	0.27	-0.7
3,948,709	+		RR42_RS18220	0.28	+1.3
3,948,709	+		RR42_RS18220	0.28	-0.2
3,948,710	-		RR42_RS18220	0.28	+1.0
3,948,710	-		RR42_RS18220	0.28	+0.1
3,948,748	+		RR42_RS18220	0.32	+0.7
3,948,748	+		RR42_RS18220	0.32	+0.2
3,948,915	+		RR42_RS18220	0.50	+0.8
3,948,915	+		RR42_RS18220	0.50	+0.2
3,948,915	+		RR42_RS18220	0.50	-1.9
3,948,916	-		RR42_RS18220	0.50	+0.5
3,948,916	-		RR42_RS18220	0.50	-0.1
3,948,916	-		RR42_RS18220	0.50	-2.3
3,948,916	-		RR42_RS18220	0.50	+0.2
3,948,916	-		RR42_RS18220	0.50	-0.4
3,948,919	+		RR42_RS18220	0.50	+0.8
3,948,919	+		RR42_RS18220	0.50	+0.1
3,948,919	+		RR42_RS18220	0.50	-1.1
3,948,919	+		RR42_RS18220	0.50	+0.7
3,948,919	+		RR42_RS18220	0.50	+0.2
3,948,919	+		RR42_RS18220	0.50	-1.0
3,948,919	+		RR42_RS18220	0.50	+0.4
3,948,920	-		RR42_RS18220	0.50	+0.0
3,948,920	-		RR42_RS18220	0.50	+0.6
3,948,986	+		RR42_RS18220	0.57	-1.1
3,948,988	+		RR42_RS18220	0.57	+0.4
3,949,091	+		RR42_RS18220	0.68	-0.6
3,949,092	-		RR42_RS18220	0.68	+0.0
3,949,092	-		RR42_RS18220	0.68	-0.7
3,949,093	-		RR42_RS18220	0.68	+0.0
3,949,209	+		RR42_RS18220	0.80	+0.1
3,949,356	+				-0.5
3,949,356	+				+1.6
3,949,356	+				-0.4
3,949,372	-				+0.6
3,949,558	+				-0.2
3,949,559	-				-1.5
3,949,605	+				+0.8
3,949,606	-				+0.5
3,949,617	+				-1.2
3,949,630	-				+0.9