Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17470

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,782,297	-				+0.1
3,782,472	-		RR42_RS17470	0.42	+0.6
3,782,489	-		RR42_RS17470	0.45	+1.4
3,782,489	-		RR42_RS17470	0.45	-0.4
3,782,489	-		RR42_RS17470	0.45	+1.1
3,782,489	-		RR42_RS17470	0.45	-1.8
3,782,489	-		RR42_RS17470	0.45	+1.2
3,782,489	-		RR42_RS17470	0.45	-0.4
3,782,493	-		RR42_RS17470	0.46	+0.5
3,782,493	-		RR42_RS17470	0.46	-0.6
3,782,546	-		RR42_RS17470	0.57	+0.5
3,782,546	-		RR42_RS17470	0.57	+2.0
3,782,546	-		RR42_RS17470	0.57	+0.2
3,782,546	-		RR42_RS17470	0.57	+0.4
3,782,791	-				-0.6
3,782,791	-				-0.3
3,782,857	+				-0.0
3,782,857	+				+0.5
3,782,857	+				+1.8
3,782,857	+				+0.4
3,783,323	+		RR42_RS17475	0.51	+0.0
3,783,323	+		RR42_RS17475	0.51	-0.0
3,783,323	+		RR42_RS17475	0.51	+0.6
3,783,323	+		RR42_RS17475	0.51	+2.4
3,783,323	+		RR42_RS17475	0.51	-2.5
3,783,323	+		RR42_RS17475	0.51	-0.6
3,783,323	+		RR42_RS17475	0.51	-0.2
3,783,323	+		RR42_RS17475	0.51	+0.8
3,783,323	+		RR42_RS17475	0.51	-0.3
3,783,324	-		RR42_RS17475	0.51	-0.1
3,783,324	-		RR42_RS17475	0.51	-0.2
3,783,324	-		RR42_RS17475	0.51	-2.1
3,783,324	-		RR42_RS17475	0.51	+0.3
3,783,352	+		RR42_RS17475	0.54	-0.1
3,783,353	-		RR42_RS17475	0.54	-0.3
3,783,353	-		RR42_RS17475	0.54	-1.2
3,783,353	-		RR42_RS17475	0.54	+2.2
3,783,353	-				+3.2
3,783,353	-		RR42_RS17475	0.54	+0.2
3,783,430	+		RR42_RS17475	0.63	+0.1
3,783,430	+		RR42_RS17475	0.63	+0.4
3,783,433	+		RR42_RS17475	0.63	-0.9
3,783,434	-		RR42_RS17475	0.63	+1.5
3,783,658	+		RR42_RS17475	0.88	-2.4
3,783,658	+		RR42_RS17475	0.88	+0.1
3,783,658	+		RR42_RS17475	0.88	-0.9
3,783,659	-		RR42_RS17475	0.88	-0.2
3,783,659	-		RR42_RS17475	0.88	-0.3
3,783,659	-		RR42_RS17475	0.88	+0.6
3,783,659	-		RR42_RS17475	0.88	-0.4
3,783,659	-		RR42_RS17475	0.88	+0.7
3,783,659	-		RR42_RS17475	0.88	-1.3
3,783,659	-		RR42_RS17475	0.88	-0.3
3,783,659	-		RR42_RS17475	0.88	-0.0