Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16795

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,633,385	+				-0.9
3,633,385	+				-0.1
3,633,385	+				-0.2
3,633,386	-				-0.3
3,633,386	-				+0.9
3,633,394	-				-0.5
3,633,755	+		RR42_RS16790	0.44	+0.8
3,633,755	+		RR42_RS16790	0.44	+1.1
3,633,756	-		RR42_RS16790	0.44	-0.9
3,633,895	+		RR42_RS16790	0.62	-0.6
3,633,923	+		RR42_RS16790	0.65	+0.6
3,634,002	+		RR42_RS16790	0.75	-0.5
3,634,002	+		RR42_RS16790	0.75	-0.1
3,634,005	+		RR42_RS16790	0.76	+0.1
3,634,114	-		RR42_RS16790	0.89	-0.7
3,634,212	+				+0.5
3,634,311	+				+0.0
3,634,322	+				-0.4
3,634,323	-				+0.5
3,634,368	+				+0.9
3,634,369	-				-0.3
3,634,446	+		RR42_RS16795	0.16	+1.2
3,634,446	+		RR42_RS16795	0.16	+1.2
3,634,605	+		RR42_RS16795	0.30	-0.8
3,634,605	+		RR42_RS16795	0.30	-0.8
3,634,956	+		RR42_RS16795	0.61	+0.3
3,634,956	+		RR42_RS16795	0.61	-0.8
3,634,956	+		RR42_RS16795	0.61	+0.4
3,634,956	+		RR42_RS16795	0.61	-0.3
3,634,957	-		RR42_RS16795	0.61	-0.1
3,635,109	+		RR42_RS16795	0.74	+0.3
3,635,110	-		RR42_RS16795	0.74	-0.3
3,635,110	-		RR42_RS16795	0.74	-0.1
3,635,214	+		RR42_RS16795	0.83	-0.1
3,635,215	-		RR42_RS16795	0.83	-0.5
3,635,215	-		RR42_RS16795	0.83	-0.2
3,635,284	-		RR42_RS16795	0.89	-1.0
3,635,284	-		RR42_RS16795	0.89	-0.5
3,635,284	-		RR42_RS16795	0.89	-0.6
3,635,284	-		RR42_RS16795	0.89	+0.8
3,635,456	+				-0.1
3,635,456	+				+0.7
3,635,457	-				-0.4
3,635,457	-				-1.4
3,635,460	+				-0.5
3,635,460	+				-0.2
3,635,461	-				+0.5
3,635,461	-				-1.2
3,635,487	+				+0.7
3,635,488	-				+0.2
3,635,488	-				-0.4
3,635,488	-				+0.5
3,635,488	-				-0.3
3,635,488	-				-1.1
3,635,745	+		RR42_RS16800	0.40	-0.8
3,635,745	+		RR42_RS16800	0.40	-0.2
3,635,745	+		RR42_RS16800	0.40	-0.1
3,635,745	+		RR42_RS16800	0.40	+2.8
3,635,745	+		RR42_RS16800	0.40	-1.2
3,635,745	+		RR42_RS16800	0.40	+0.4
3,635,746	-		RR42_RS16800	0.40	-0.3
3,635,916	+		RR42_RS16800	0.61	-0.1
3,635,917	-		RR42_RS16800	0.61	+0.2
3,636,098	+		RR42_RS16800	0.83	+0.4
3,636,099	-		RR42_RS16800	0.83	+0.8
3,636,099	-		RR42_RS16800	0.83	+2.2