Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16760
Experiment: R2A with A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with A22 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,624,291 | - | RR42_RS16755 | 0.41 | +0.8 | |
3,624,374 | + | RR42_RS16755 | 0.47 | -0.1 | |
3,625,045 | - | -0.4 | |||
3,625,154 | + | +1.4 | |||
3,625,169 | + | +0.8 | |||
3,625,441 | + | RR42_RS16760 | 0.15 | -1.3 | |
3,625,579 | + | RR42_RS16760 | 0.23 | +0.4 | |
3,625,611 | - | RR42_RS16760 | 0.25 | +1.0 | |
3,625,943 | - | RR42_RS16760 | 0.44 | -0.1 | |
3,626,323 | + | RR42_RS16760 | 0.67 | -1.1 | |
3,626,324 | - | RR42_RS16760 | 0.67 | -1.0 | |
3,626,612 | - | RR42_RS16760 | 0.84 | -2.4 | |
3,627,566 | + | RR42_RS16765 | 0.44 | -0.4 | |
3,627,845 | + | RR42_RS16765 | 0.62 | +0.4 | |
3,627,845 | + | RR42_RS16765 | 0.62 | +0.4 | |
3,627,845 | + | RR42_RS16765 | 0.62 | +1.2 |
Or see this region's nucleotide sequence