Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16595

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,595,295	+		RR42_RS16585	0.77	+2.0
3,595,313	+		RR42_RS16585	0.80	-1.2
3,595,313	+		RR42_RS16585	0.80	-0.2
3,595,314	-		RR42_RS16585	0.80	+0.6
3,595,381	+				-0.7
3,595,382	-				-0.4
3,595,492	+				-0.4
3,595,493	-				+2.2
3,595,515	+				+0.2
3,595,515	+				+0.2
3,595,515	+				+0.1
3,595,648	+		RR42_RS16590	0.20	+0.4
3,595,723	+		RR42_RS16590	0.31	+0.2
3,595,740	+		RR42_RS16590	0.34	+0.9
3,595,986	+		RR42_RS16590	0.70	+0.4
3,595,987	-		RR42_RS16590	0.70	-2.6
3,596,241	-				+0.5
3,596,275	+				-0.5
3,596,277	+				-0.3
3,596,277	+				+0.2
3,596,279	+				+0.9
3,596,280	-				-1.0
3,596,407	-		RR42_RS16595	0.11	+0.4
3,596,431	+		RR42_RS16595	0.13	-0.3
3,596,431	+		RR42_RS16595	0.13	+0.4
3,596,431	+		RR42_RS16595	0.13	+0.9
3,596,432	-		RR42_RS16595	0.13	+0.5
3,596,467	+		RR42_RS16595	0.16	+0.8
3,596,467	+		RR42_RS16595	0.16	-0.2
3,596,507	+		RR42_RS16595	0.20	-0.3
3,596,613	+		RR42_RS16595	0.28	+0.0
3,596,613	+		RR42_RS16595	0.28	-2.0
3,596,616	-		RR42_RS16595	0.28	-1.3
3,596,624	+		RR42_RS16595	0.29	-1.8
3,596,705	+		RR42_RS16595	0.36	+1.2
3,596,706	-		RR42_RS16595	0.36	-0.6
3,596,776	-		RR42_RS16595	0.41	-0.4
3,596,776	-		RR42_RS16595	0.41	-0.4
3,596,776	-		RR42_RS16595	0.41	+0.3
3,596,776	-		RR42_RS16595	0.41	-1.1
3,596,917	+		RR42_RS16595	0.53	-0.0
3,596,932	+		RR42_RS16595	0.54	+0.4
3,596,993	-		RR42_RS16595	0.59	+0.5
3,597,046	+		RR42_RS16595	0.63	+0.4
3,597,065	+		RR42_RS16595	0.65	+0.4
3,597,078	+		RR42_RS16595	0.66	+0.2
3,597,108	+		RR42_RS16595	0.68	+0.5
3,597,126	+		RR42_RS16595	0.69	-0.2
3,597,163	+		RR42_RS16595	0.72	-0.3
3,597,164	-		RR42_RS16595	0.73	-1.1
3,597,164	-		RR42_RS16595	0.73	-0.6
3,597,172	+		RR42_RS16595	0.73	+0.1
3,597,204	+		RR42_RS16595	0.76	-0.9
3,597,207	+		RR42_RS16595	0.76	+0.3
3,597,207	+		RR42_RS16595	0.76	-0.0
3,597,207	+		RR42_RS16595	0.76	-0.7
3,597,207	+		RR42_RS16595	0.76	-0.5
3,597,208	-		RR42_RS16595	0.76	-0.2
3,597,208	-		RR42_RS16595	0.76	+1.5
3,597,208	-		RR42_RS16595	0.76	-1.8
3,597,329	+		RR42_RS16595	0.86	-0.2
3,597,329	+		RR42_RS16595	0.86	-0.8
3,597,330	-		RR42_RS16595	0.86	+0.2
3,597,364	+		RR42_RS16595	0.89	-0.7
3,597,617	+				-0.9
3,597,618	-				-0.9
3,597,618	-				+0.2
3,597,667	+		RR42_RS16600	0.10	-0.6
3,597,735	+		RR42_RS16600	0.15	-0.4
3,597,735	+		RR42_RS16600	0.15	+0.1
3,597,736	-		RR42_RS16600	0.15	+0.9
3,597,852	-		RR42_RS16600	0.22	-0.3
3,597,852	-		RR42_RS16600	0.22	+0.3
3,597,876	+		RR42_RS16600	0.23	+0.8
3,597,876	+		RR42_RS16600	0.23	+1.2
3,597,961	-		RR42_RS16600	0.29	-0.5
3,597,961	-		RR42_RS16600	0.29	+0.1
3,597,980	+		RR42_RS16600	0.30	-0.0
3,597,981	-		RR42_RS16600	0.30	+0.8
3,598,073	-		RR42_RS16600	0.36	+0.3
3,598,073	-		RR42_RS16600	0.36	-0.5
3,598,094	+		RR42_RS16600	0.37	-0.0
3,598,094	+		RR42_RS16600	0.37	-1.1
3,598,094	+		RR42_RS16600	0.37	-0.6
3,598,094	+		RR42_RS16600	0.37	-1.3
3,598,137	+		RR42_RS16600	0.40	-0.2
3,598,138	-		RR42_RS16600	0.40	-0.8
3,598,138	-		RR42_RS16600	0.40	-0.4
3,598,138	-		RR42_RS16600	0.40	-1.1
3,598,273	+		RR42_RS16600	0.48	-1.0
3,598,273	+		RR42_RS16600	0.48	+0.6
3,598,274	-		RR42_RS16600	0.48	-1.1
3,598,274	-		RR42_RS16600	0.48	-0.8
3,598,291	+		RR42_RS16600	0.49	-2.2
3,598,292	-		RR42_RS16600	0.49	+0.3
3,598,292	-		RR42_RS16600	0.49	+0.2
3,598,300	+		RR42_RS16600	0.50	-0.6
3,598,301	-		RR42_RS16600	0.50	-0.8
3,598,301	-		RR42_RS16600	0.50	-0.0
3,598,329	+		RR42_RS16600	0.52	-0.1
3,598,329	+		RR42_RS16600	0.52	-1.2
3,598,329	+		RR42_RS16600	0.52	+0.1
3,598,329	+		RR42_RS16600	0.52	-0.7
3,598,329	+		RR42_RS16600	0.52	-0.7
3,598,331	+		RR42_RS16600	0.52	-0.1
3,598,332	-		RR42_RS16600	0.52	-0.4
3,598,454	+		RR42_RS16600	0.59	-0.8
3,598,455	-		RR42_RS16600	0.60	+0.7