Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16525

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,579,349	+				+0.2
3,579,350	-				-0.7
3,579,360	-				-1.1
3,579,436	-		RR42_RS16520	0.24	+0.1
3,579,436	-		RR42_RS16520	0.24	+1.1
3,579,520	-		RR42_RS16520	0.39	+0.4
3,579,735	+		RR42_RS16520	0.79	+0.3
3,580,193	+		RR42_RS16525	0.44	-0.5
3,580,373	+		RR42_RS16525	0.67	+0.4
3,580,440	-		RR42_RS16525	0.75	-2.3
3,580,463	+		RR42_RS16525	0.78	-2.3
3,580,521	-		RR42_RS16525	0.86	-0.4
3,580,521	-		RR42_RS16525	0.86	+0.4
3,580,759	+				+0.1
3,580,759	+				+0.4
3,580,759	+				+0.6
3,580,952	-		RR42_RS16530	0.20	-1.2
3,581,065	+		RR42_RS16530	0.32	-1.6
3,581,066	-		RR42_RS16530	0.32	+0.4
3,581,074	-		RR42_RS16530	0.33	+0.7
3,581,074	-		RR42_RS16530	0.33	-0.2
3,581,126	-		RR42_RS16530	0.39	-1.2
3,581,140	+		RR42_RS16530	0.40	+0.9
3,581,186	+		RR42_RS16530	0.45	-0.6
3,581,228	+		RR42_RS16530	0.50	+0.0
3,581,228	+		RR42_RS16530	0.50	-0.3
3,581,405	+		RR42_RS16530	0.68	-1.4
3,581,406	-		RR42_RS16530	0.68	-0.6
3,581,453	+		RR42_RS16530	0.73	-0.2
3,581,454	-		RR42_RS16530	0.73	-0.4
3,581,527	+		RR42_RS16530	0.81	-0.4
3,581,527	+		RR42_RS16530	0.81	-0.5
3,581,527	+		RR42_RS16530	0.81	+0.7
3,581,528	-		RR42_RS16530	0.81	+0.2
3,581,540	-		RR42_RS16530	0.83	+1.9