Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15825

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,419,857	+		RR42_RS15820	0.78	-0.2
3,419,858	-		RR42_RS15820	0.79	-0.1
3,419,858	-		RR42_RS15820	0.79	+0.1
3,419,907	-		RR42_RS15820	0.82	+0.7
3,420,010	+		RR42_RS15820	0.90	-2.0
3,420,011	-		RR42_RS15820	0.90	-0.6
3,420,011	-		RR42_RS15820	0.90	-0.3
3,420,011	-		RR42_RS15820	0.90	-0.2
3,420,011	-		RR42_RS15820	0.90	+0.3
3,420,015	-				-0.8
3,420,015	-				-0.5
3,420,084	+				-1.4
3,420,084	+				-1.6
3,420,085	-				-0.2
3,420,122	-				-0.0
3,420,122	-				-0.2
3,420,122	-				-0.2
3,420,141	-				-1.3
3,420,162	+				-2.4
3,420,218	+				-1.5
3,420,219	-				-0.8
3,420,219	-				-0.4
3,420,219	-				-0.0
3,420,276	+				-0.1
3,420,323	+				-0.4
3,420,323	+				-1.0
3,420,324	-				-0.8
3,420,324	-				+0.8
3,420,324	-				+0.3
3,420,350	+				-0.2
3,420,351	-				-0.3
3,420,385	-				-0.2
3,420,385	-				+0.7
3,420,585	+				+1.0
3,420,586	-				-0.0
3,420,586	-				-1.0
3,420,598	+				+0.8
3,420,621	+				-0.4
3,420,719	+				-1.2
3,420,719	+				+1.8
3,420,720	-				-0.7
3,420,801	+				-0.5
3,420,802	-				+0.4
3,420,802	-				-1.4
3,420,802	-				-2.0
3,420,802	-				+0.2
3,421,062	+		RR42_RS15825	0.13	-1.1
3,421,198	+		RR42_RS15825	0.20	-0.9
3,421,552	+		RR42_RS15825	0.39	-0.6
3,421,580	+		RR42_RS15825	0.40	-1.6
3,421,594	+		RR42_RS15825	0.41	-1.3
3,421,624	-		RR42_RS15825	0.42	+0.4
3,421,624	-		RR42_RS15825	0.42	-0.6
3,421,638	+		RR42_RS15825	0.43	+0.3
3,421,722	-		RR42_RS15825	0.47	+0.1
3,421,722	-		RR42_RS15825	0.47	+0.5
3,421,774	-		RR42_RS15825	0.50	-0.8
3,421,774	-		RR42_RS15825	0.50	-2.4
3,421,931	+		RR42_RS15825	0.58	-1.5
3,421,931	+		RR42_RS15825	0.58	-1.5
3,421,931	+		RR42_RS15825	0.58	-1.0
3,421,931	+		RR42_RS15825	0.58	-1.2
3,421,931	+		RR42_RS15825	0.58	-1.2
3,421,932	-		RR42_RS15825	0.58	-2.2
3,421,932	-		RR42_RS15825	0.58	-1.1
3,422,049	-		RR42_RS15825	0.65	-1.4
3,422,283	+		RR42_RS15825	0.77	+0.8
3,422,283	+		RR42_RS15825	0.77	-2.7
3,422,284	-		RR42_RS15825	0.77	+0.4
3,422,284	-		RR42_RS15825	0.77	-1.0
3,422,284	-		RR42_RS15825	0.77	-0.7
3,422,365	+		RR42_RS15825	0.81	-1.1
3,422,365	+		RR42_RS15825	0.81	-0.3
3,422,366	-		RR42_RS15825	0.81	-0.5
3,422,367	+		RR42_RS15825	0.81	-0.7
3,422,367	+		RR42_RS15825	0.81	-1.3
3,422,368	-		RR42_RS15825	0.81	-0.5
3,422,368	-		RR42_RS15825	0.81	-1.2
3,422,368	-		RR42_RS15825	0.81	-0.8
3,422,388	+		RR42_RS15825	0.82	-1.1
3,422,389	-		RR42_RS15825	0.82	-0.1
3,422,508	+		RR42_RS15825	0.88	+0.1
3,422,508	+		RR42_RS15825	0.88	-1.0
3,422,508	+		RR42_RS15825	0.88	-1.7
3,422,508	+		RR42_RS15825	0.88	-1.4
3,422,508	+		RR42_RS15825	0.88	-1.4
3,422,527	-		RR42_RS15825	0.89	-1.7
3,422,741	-				+0.8
3,422,756	+				-1.5
3,422,822	+				+0.2
3,423,373	-				-1.6