Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15740

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,401,556	+		RR42_RS15735	0.37	-0.2
3,401,557	-		RR42_RS15735	0.38	-0.1
3,401,557	-		RR42_RS15735	0.38	-0.5
3,401,584	-		RR42_RS15735	0.40	-0.9
3,401,586	+		RR42_RS15735	0.40	-0.6
3,401,587	-		RR42_RS15735	0.40	-0.1
3,401,587	-		RR42_RS15735	0.40	-1.0
3,401,785	+		RR42_RS15735	0.57	-1.2
3,401,786	-		RR42_RS15735	0.57	+1.3
3,401,979	-		RR42_RS15735	0.74	+0.6
3,402,040	+		RR42_RS15735	0.79	-0.4
3,402,040	+		RR42_RS15735	0.79	-0.3
3,402,041	-		RR42_RS15735	0.79	-0.4
3,402,126	-		RR42_RS15735	0.87	+0.3
3,402,126	-		RR42_RS15735	0.87	-0.7
3,402,269	-				-0.3
3,402,269	-				-0.7
3,402,280	+				-0.6
3,402,281	-				+1.0
3,402,281	-				+0.0
3,402,299	-				-0.3
3,402,312	-				+1.0
3,402,478	+				+0.5
3,402,586	-		RR42_RS15740	0.20	-1.2
3,402,630	-		RR42_RS15740	0.29	-0.6
3,402,714	+		RR42_RS15740	0.47	-2.0
3,402,929	-				+0.4
3,403,004	-				+0.2
3,403,004	-				+0.2
3,403,011	-				-1.3
3,403,019	+				-0.5
3,403,019	+				-1.4
3,403,019	+				+1.1
3,403,019	+				-0.7
3,403,020	-				-0.2
3,403,020	-				-0.7
3,403,020	-				-0.4
3,403,020	-				+1.5
3,403,121	+				-2.5
3,403,192	+		RR42_RS15745	0.13	-1.4
3,403,282	+		RR42_RS15745	0.20	-1.5
3,403,283	-		RR42_RS15745	0.21	-2.2
3,403,321	+		RR42_RS15745	0.24	+0.3
3,403,345	+		RR42_RS15745	0.26	+0.9
3,403,351	+		RR42_RS15745	0.26	-0.5
3,403,351	+		RR42_RS15745	0.26	-0.7
3,403,351	+		RR42_RS15745	0.26	-0.5
3,403,351	+		RR42_RS15745	0.26	-0.4
3,403,552	+		RR42_RS15745	0.42	+1.4
3,403,714	+		RR42_RS15745	0.55	-0.7
3,403,906	+		RR42_RS15745	0.71	-0.9
3,403,906	+		RR42_RS15745	0.71	-0.8
3,403,915	+		RR42_RS15745	0.72	-0.7