Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15700

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,391,549	+		RR42_RS15695	0.16	-0.1
3,391,549	+		RR42_RS15695	0.16	+0.8
3,391,549	+		RR42_RS15695	0.16	-0.1
3,391,549	+		RR42_RS15695	0.16	+0.9
3,391,658	+		RR42_RS15695	0.26	+1.5
3,391,678	+		RR42_RS15695	0.27	+0.5
3,391,721	+		RR42_RS15695	0.31	+0.9
3,391,722	-		RR42_RS15695	0.31	+1.9
3,391,722	-		RR42_RS15695	0.31	+0.1
3,391,722	-		RR42_RS15695	0.31	+1.1
3,391,722	-		RR42_RS15695	0.31	-0.2
3,392,642	-				+0.9
3,392,684	+		RR42_RS15700	0.13	+0.8
3,392,684	+		RR42_RS15700	0.13	+0.5
3,392,684	+		RR42_RS15700	0.13	+1.0
3,392,684	+		RR42_RS15700	0.13	-0.5
3,392,685	-		RR42_RS15700	0.13	+1.1
3,392,723	+		RR42_RS15700	0.16	+0.9
3,392,882	+		RR42_RS15700	0.28	-0.9
3,392,882	+		RR42_RS15700	0.28	+0.5
3,392,882	+		RR42_RS15700	0.28	+1.3
3,392,882	+		RR42_RS15700	0.28	-0.5
3,392,883	-		RR42_RS15700	0.28	+0.5
3,392,883	-		RR42_RS15700	0.28	+0.5
3,392,883	-		RR42_RS15700	0.28	+0.4
3,392,883	-		RR42_RS15700	0.28	+0.5
3,392,883	-		RR42_RS15700	0.28	+1.1
3,392,936	+		RR42_RS15700	0.32	+0.9
3,392,936	+		RR42_RS15700	0.32	+1.0
3,392,936	+		RR42_RS15700	0.32	+0.9
3,392,937	-		RR42_RS15700	0.32	+2.7
3,392,937	-		RR42_RS15700	0.32	+0.3
3,392,956	+		RR42_RS15700	0.33	+1.3
3,393,151	-		RR42_RS15700	0.48	+1.2
3,393,151	-		RR42_RS15700	0.48	+0.9
3,393,158	+		RR42_RS15700	0.49	-1.6
3,393,159	-		RR42_RS15700	0.49	-0.8
3,393,254	+		RR42_RS15700	0.56	+0.9
3,393,254	+		RR42_RS15700	0.56	-0.6
3,393,254	+		RR42_RS15700	0.56	-1.9
3,393,276	+		RR42_RS15700	0.58	-0.5
3,393,327	+		RR42_RS15700	0.62	+1.0
3,393,334	-		RR42_RS15700	0.62	+0.9
3,393,518	+		RR42_RS15700	0.76	+1.6
3,393,632	+		RR42_RS15700	0.85	+0.8
3,393,632	+		RR42_RS15700	0.85	+2.1
3,393,632	+		RR42_RS15700	0.85	+0.7
3,393,633	-		RR42_RS15700	0.85	+0.1
3,393,635	+		RR42_RS15700	0.85	+1.7
3,393,696	-		RR42_RS15700	0.90	+1.8
3,393,696	-		RR42_RS15700	0.90	+0.7
3,393,734	+				+0.6
3,393,734	+				-0.6
3,393,735	-				+1.1
3,393,746	+				+0.2
3,393,747	-				+2.1
3,393,818	+				+1.4
3,393,873	+				+0.9
3,393,885	+				-0.7
3,393,885	+				-0.5
3,393,885	+				+0.4
3,393,885	+				-0.5
3,393,886	-				+0.3
3,394,005	-		RR42_RS15705	0.12	+0.2
3,394,200	+		RR42_RS15705	0.30	-0.0
3,394,200	+		RR42_RS15705	0.30	+0.2
3,394,200	+		RR42_RS15705	0.30	+1.1
3,394,200	+		RR42_RS15705	0.30	+0.2
3,394,201	-		RR42_RS15705	0.30	-0.3