Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15415

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,331,323	-		RR42_RS15405	0.61	-1.1
3,331,563	+				-0.6
3,331,563	+				-0.4
3,331,564	-				-0.1
3,331,564	-				+1.1
3,331,596	-				-0.2
3,331,596	-				+0.2
3,331,611	+				+0.3
3,331,612	-				-0.0
3,331,640	+				-0.9
3,331,642	+				+1.6
3,331,651	+				+0.2
3,331,669	+				-1.2
3,331,669	+				+0.1
3,331,672	+				-2.4
3,331,760	+				-0.2
3,331,765	+				+0.4
3,331,766	-				+1.6
3,331,768	+				+1.2
3,331,768	+				-0.1
3,331,898	+		RR42_RS15410	0.16	+0.0
3,332,046	+		RR42_RS15410	0.70	-0.1
3,332,046	+		RR42_RS15410	0.70	-1.1
3,332,047	-		RR42_RS15410	0.70	-0.6
3,332,111	-				+0.5
3,332,111	-				+0.1
3,332,127	+				+0.5
3,332,329	+				+0.2
3,332,330	-				-1.2
3,332,561	+		RR42_RS15415	0.69	+1.0
3,332,562	-		RR42_RS15415	0.69	+0.3
3,332,562	-		RR42_RS15415	0.69	+0.8
3,332,846	-		RR42_RS15420	0.33	-0.3
3,332,846	-		RR42_RS15420	0.33	+0.8
3,333,091	+		RR42_RS15420	0.82	+0.7
3,333,092	-		RR42_RS15420	0.82	-0.3
3,333,260	-				-0.5
3,333,288	+				-0.2
3,333,380	+				-0.1
3,333,380	+				-0.9
3,333,381	-				-0.4
3,333,549	+		RR42_RS15425	0.16	-0.3
3,333,620	+		RR42_RS15425	0.22	-2.1
3,333,621	-		RR42_RS15425	0.22	+2.1
3,333,659	+		RR42_RS15425	0.26	+0.4