Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15020

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,247,109	-		RR42_RS15015	0.43	+0.6
3,247,263	-				+0.4
3,247,462	+				-2.0
3,247,462	+				-0.6
3,247,463	-				-1.3
3,247,631	+				-0.8
3,247,632	-				-1.6
3,247,697	-				-0.9
3,247,697	-				-1.2
3,247,951	+		RR42_RS15020	0.29	-0.3
3,247,952	-		RR42_RS15020	0.29	-0.7
3,248,122	+		RR42_RS15020	0.44	-0.7
3,248,122	+		RR42_RS15020	0.44	-0.1
3,248,122	+		RR42_RS15020	0.44	-0.8
3,248,158	+		RR42_RS15020	0.48	-0.7
3,248,159	-		RR42_RS15020	0.48	-1.0
3,248,159	-		RR42_RS15020	0.48	-0.7
3,248,185	+		RR42_RS15020	0.50	-1.0
3,248,186	-		RR42_RS15020	0.50	-0.6
3,248,197	+		RR42_RS15020	0.51	+1.0
3,248,197	+		RR42_RS15020	0.51	-0.2
3,248,198	-		RR42_RS15020	0.51	+0.0
3,248,198	-		RR42_RS15020	0.51	-1.5
3,248,332	+		RR42_RS15020	0.63	+0.7
3,248,386	+		RR42_RS15020	0.68	-0.5
3,248,387	-		RR42_RS15020	0.68	-1.0
3,248,387	-		RR42_RS15020	0.68	+0.2
3,248,407	+		RR42_RS15020	0.70	-2.5
3,248,407	+		RR42_RS15020	0.70	-0.9
3,248,407	+		RR42_RS15020	0.70	-2.0
3,248,408	-		RR42_RS15020	0.70	-1.2
3,248,506	+		RR42_RS15020	0.79	-1.9
3,248,507	-		RR42_RS15020	0.79	+0.5
3,248,507	-		RR42_RS15020	0.79	+0.5
3,248,507	-		RR42_RS15020	0.79	-0.3
3,248,507	-		RR42_RS15020	0.79	-0.5
3,248,507	-		RR42_RS15020	0.79	-0.2
3,248,507	-		RR42_RS15020	0.79	-2.0
3,248,686	-				-0.2
3,248,707	+				-1.2
3,248,708	-				-1.1
3,248,727	+				-0.2
3,248,857	+				+1.8
3,249,079	+				+0.4
3,249,079	+				-0.4
3,249,079	+				+0.6
3,249,079	+				+0.4
3,249,079	+				-2.0
3,249,080	-				+0.6
3,249,080	-				+0.3
3,249,080	-				-0.8
3,249,080	-				+1.8
3,249,103	+		RR42_RS15025	0.11	-0.3
3,249,189	+		RR42_RS15025	0.20	-0.6
3,249,189	+		RR42_RS15025	0.20	-0.1
3,249,189	+		RR42_RS15025	0.20	+3.0
3,249,190	-		RR42_RS15025	0.21	-0.0
3,249,190	-		RR42_RS15025	0.21	+0.2
3,249,190	-		RR42_RS15025	0.21	+0.1
3,249,190	-		RR42_RS15025	0.21	+0.0
3,249,190	-		RR42_RS15025	0.21	+0.1
3,249,280	+		RR42_RS15025	0.30	+0.0
3,249,281	-		RR42_RS15025	0.30	-0.2
3,249,281	-		RR42_RS15025	0.30	+0.7
3,249,281	-		RR42_RS15025	0.30	-0.7
3,249,281	-		RR42_RS15025	0.30	-0.1
3,249,281	-		RR42_RS15025	0.30	-0.2
3,249,481	+		RR42_RS15025	0.52	+1.0
3,249,538	+		RR42_RS15025	0.58	-1.7
3,249,538	+		RR42_RS15025	0.58	-0.3
3,249,538	+		RR42_RS15025	0.58	-0.6
3,249,539	-		RR42_RS15025	0.58	+0.0
3,249,563	+		RR42_RS15025	0.61	-0.2
3,249,564	-		RR42_RS15025	0.61	-0.2
3,249,564	-		RR42_RS15025	0.61	+1.8
3,249,583	+		RR42_RS15025	0.63	-1.5
3,249,584	-		RR42_RS15025	0.63	-1.1
3,249,679	+		RR42_RS15025	0.74	-0.7
3,249,679	+		RR42_RS15025	0.74	+0.0
3,249,680	-		RR42_RS15025	0.74	-1.3
3,249,680	-		RR42_RS15025	0.74	+0.6
3,249,718	+		RR42_RS15025	0.78	-0.7
3,249,719	-		RR42_RS15025	0.78	-0.6