Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14870

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
3,203,698	+		RR42_RS14860	0.11	-1.0
3,203,725	-		RR42_RS14860	0.25	-0.2
3,203,725	-		RR42_RS14860	0.25	-1.0
3,203,858	+				+0.5
3,203,859	-				-1.2
3,203,868	+				-0.1
3,204,689	-				-0.0
3,205,139	-		RR42_RS14870	0.46	-0.5
3,205,159	+		RR42_RS14870	0.48	+0.2
3,205,160	-		RR42_RS14870	0.48	-0.1
3,205,160	-		RR42_RS14870	0.48	-0.5
3,205,436	-		RR42_RS14870	0.71	+0.1
3,205,450	+		RR42_RS14870	0.72	-0.4
3,205,450	+		RR42_RS14870	0.72	+0.3
3,205,450	+		RR42_RS14870	0.72	-1.0
3,205,472	-		RR42_RS14870	0.74	-1.3
3,205,490	-		RR42_RS14870	0.75	+0.3
3,205,490	-		RR42_RS14870	0.75	-0.2
3,205,490	-		RR42_RS14870	0.75	+0.3
3,205,543	+		RR42_RS14870	0.80	-1.2
3,205,543	+		RR42_RS14870	0.80	+0.0
3,205,546	+		RR42_RS14870	0.80	+0.4
3,205,546	+		RR42_RS14870	0.80	+1.0
3,205,547	-		RR42_RS14870	0.80	-0.2
3,205,547	-		RR42_RS14870	0.80	-0.9
3,205,547	-		RR42_RS14870	0.80	+0.4
3,205,547	-		RR42_RS14870	0.80	-0.3
3,205,547	-		RR42_RS14870	0.80	+0.7
3,205,582	+		RR42_RS14870	0.83	+1.0
3,205,626	-		RR42_RS14870	0.87	+1.0
3,205,651	+		RR42_RS14870	0.89	-0.0
3,205,685	-				-0.1
3,205,715	-				-0.6
3,205,717	+				-0.1
3,205,717	+				-0.2
3,205,717	+				-0.1
3,205,718	-				+0.2
3,205,718	-				+0.8
3,205,718	-				-0.1
3,205,969	+				-0.2
3,205,970	-				+0.2
3,206,047	+				+0.7
3,206,047	+				+0.5
3,206,260	+				+0.2
3,206,260	+				-0.4
3,206,260	+				-0.2
3,206,260	+				+0.5
3,206,261	-				-2.0
3,206,309	-				-0.1
3,206,564	-				-1.0
3,206,656	+				+1.2
3,206,657	-				-1.5
3,206,689	+				+3.4
3,206,690	-				+0.4
3,206,690	-				-0.3