Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13305
Experiment: R2A with A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with A22 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,871,486 | - | RR42_RS13305 | 0.49 | -0.9 | |
2,871,629 | - | -1.7 | |||
2,871,687 | - | -0.8 | |||
2,871,777 | + | +1.6 | |||
2,871,781 | + | +0.8 | |||
2,871,781 | + | +0.2 | |||
2,871,784 | - | -2.2 | |||
2,871,835 | + | -0.2 | |||
2,871,836 | - | -0.7 | |||
2,871,857 | + | -0.1 | |||
2,871,900 | + | -0.8 | |||
2,871,936 | + | -0.7 | |||
2,871,988 | + | -0.4 | |||
2,871,990 | + | +0.8 | |||
2,871,990 | + | -1.2 | |||
2,871,993 | + | +0.3 | |||
2,871,993 | + | -0.6 | |||
2,871,993 | + | +0.2 | |||
2,871,993 | + | -0.3 | |||
2,871,993 | + | -0.1 | |||
2,871,994 | - | +0.4 | |||
2,871,994 | - | +0.3 | |||
2,871,995 | + | -1.0 | |||
2,871,995 | + | +1.0 | |||
2,871,995 | + | -0.3 | |||
2,871,995 | + | -1.0 | |||
2,871,995 | + | +0.0 | |||
2,871,995 | + | -0.7 | |||
2,871,995 | + | -0.8 | |||
2,871,996 | - | -0.7 | |||
2,871,996 | - | +0.0 | |||
2,871,996 | - | -0.8 | |||
2,872,089 | + | +2.8 | |||
2,872,089 | + | +0.2 | |||
2,872,123 | + | -0.6 | |||
2,872,477 | + | -0.6 | |||
2,872,481 | - | -1.8 | |||
2,872,523 | + | -2.2 | |||
2,872,524 | - | +0.3 | |||
2,872,576 | + | +0.8 | |||
2,872,576 | + | -0.6 | |||
2,872,576 | + | -1.2 |
Or see this region's nucleotide sequence