Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13060

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,812,202	-		RR42_RS13050	0.85	+0.8
2,812,331	-				-1.8
2,812,889	+		RR42_RS13055	0.66	+0.0
2,812,940	-		RR42_RS13055	0.73	+0.3
2,812,940	-		RR42_RS13055	0.73	-0.3
2,812,940	-		RR42_RS13055	0.73	-0.2
2,812,973	-		RR42_RS13055	0.77	-0.4
2,813,090	+				+1.1
2,813,090	+				+0.9
2,813,090	+				+0.2
2,813,091	-				-0.0
2,813,091	-				+1.0
2,813,091	-				+0.2
2,813,091	-				+1.0
2,813,091	-				+0.6
2,813,091	-				-0.3
2,813,146	+				+0.5
2,813,147	-				-0.3
2,813,208	+				+0.8
2,813,209	-				-1.3
2,813,209	-				-0.2
2,813,367	+		RR42_RS13060	0.26	-2.2
2,813,367	+		RR42_RS13060	0.26	-2.2
2,813,367	+		RR42_RS13060	0.26	-1.3
2,813,367	+		RR42_RS13060	0.26	-0.5
2,813,367	+		RR42_RS13060	0.26	-0.7
2,813,368	-		RR42_RS13060	0.26	-0.9
2,813,464	-		RR42_RS13060	0.39	-0.0
2,813,831	+		RR42_RS13060	0.88	+0.4
2,813,831	+		RR42_RS13060	0.88	-1.1
2,813,831	+		RR42_RS13060	0.88	-1.0
2,813,832	-		RR42_RS13060	0.88	-0.1
2,813,835	+		RR42_RS13060	0.89	+1.0
2,813,836	-		RR42_RS13060	0.89	-1.3
2,813,836	-		RR42_RS13060	0.89	-0.9
2,813,836	-		RR42_RS13060	0.89	+0.2
2,813,836	-		RR42_RS13060	0.89	-1.8
2,813,911	+				+0.3
2,813,928	+				-0.1
2,813,928	+				+0.3
2,813,928	+				-0.3
2,813,929	-				-1.6
2,813,929	-				+0.1
2,813,929	-				+1.4
2,814,541	+		RR42_RS13065	0.21	+0.4
2,814,542	-		RR42_RS13065	0.21	-0.2
2,814,602	-		RR42_RS13065	0.23	-1.8
2,814,631	+		RR42_RS13065	0.24	+0.5
2,814,632	-		RR42_RS13065	0.24	-0.9
2,814,847	+		RR42_RS13065	0.32	+1.3
2,814,848	-		RR42_RS13065	0.32	+0.2
2,814,854	+		RR42_RS13065	0.33	-0.6