Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13025

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,803,043	+		RR42_RS13020	0.74	-0.4
2,803,044	-		RR42_RS13020	0.74	-2.6
2,803,044	-		RR42_RS13020	0.74	+1.4
2,803,112	-		RR42_RS13020	0.82	-0.3
2,803,112	-		RR42_RS13020	0.82	+0.0
2,803,319	+				-0.2
2,803,319	+				+0.4
2,803,319	+				+0.4
2,803,319	+				+0.8
2,803,319	+				+0.4
2,803,320	-				+0.1
2,803,320	-				-0.1
2,803,725	+		RR42_RS13025	0.36	-1.1
2,803,755	+		RR42_RS13025	0.39	-0.3
2,803,756	-		RR42_RS13025	0.39	-1.0
2,803,906	+		RR42_RS13025	0.55	+0.2
2,803,906	+		RR42_RS13025	0.55	-2.3
2,803,972	-		RR42_RS13025	0.61	-0.2
2,803,972	-		RR42_RS13025	0.61	-3.6
2,803,972	-		RR42_RS13025	0.61	-2.1
2,804,044	-		RR42_RS13025	0.69	-0.6
2,804,354	-				-0.7
2,804,374	+				-2.0
2,804,375	-				+1.0
2,804,387	+				-0.0
2,804,388	-				+0.0
2,804,430	-				+0.2
2,804,430	-				-0.0
2,804,430	-				-0.2
2,804,430	-				+1.4
2,804,766	-				-0.3
2,804,793	-				+1.0
2,804,793	-				-0.4
2,804,906	+		RR42_RS13030	0.10	+1.3
2,804,906	+		RR42_RS13030	0.10	+1.4
2,804,906	+		RR42_RS13030	0.10	+0.7
2,804,907	-		RR42_RS13030	0.10	+0.3
2,805,095	+		RR42_RS13030	0.15	+0.3
2,805,095	+		RR42_RS13030	0.15	-0.0
2,805,095	+		RR42_RS13030	0.15	+2.0
2,805,095	+		RR42_RS13030	0.15	+0.7
2,805,096	-		RR42_RS13030	0.15	+0.4
2,805,096	-		RR42_RS13030	0.15	+0.3
2,805,096	-		RR42_RS13030	0.15	+0.3
2,805,181	+		RR42_RS13030	0.17	-0.3
2,805,275	+		RR42_RS13030	0.19	+1.0
2,805,275	+		RR42_RS13030	0.19	-1.2
2,805,275	+		RR42_RS13030	0.19	+1.0
2,805,276	-		RR42_RS13030	0.19	+0.3
2,805,276	-		RR42_RS13030	0.19	+2.6
2,805,351	-		RR42_RS13030	0.21	+0.4