Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12910

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,772,714	+				-0.3
2,772,714	+				+0.3
2,772,714	+				-1.3
2,772,715	-				-1.4
2,772,715	-				-0.7
2,772,715	-				-0.8
2,772,985	-				-0.4
2,773,386	+		RR42_RS12905	0.59	-0.3
2,773,395	+		RR42_RS12905	0.61	+1.0
2,773,465	-		RR42_RS12905	0.71	+2.5
2,773,465	-		RR42_RS12905	0.71	-1.2
2,773,465	-		RR42_RS12905	0.71	+0.3
2,773,465	-		RR42_RS12905	0.71	-1.0
2,773,465	-		RR42_RS12905	0.71	-1.1
2,773,465	-		RR42_RS12905	0.71	+1.8
2,773,468	+		RR42_RS12905	0.72	-0.3
2,773,468	+		RR42_RS12905	0.72	-0.1
2,773,759	+				-0.5
2,773,759	+				+0.0
2,773,760	-				-0.5
2,773,760	-				+0.1
2,773,826	-		RR42_RS12910	0.10	+0.6
2,773,855	+		RR42_RS12910	0.12	-0.0
2,773,855	+		RR42_RS12910	0.12	-0.6
2,773,934	-		RR42_RS12910	0.18	-0.9
2,773,934	-		RR42_RS12910	0.18	+1.0
2,773,991	-		RR42_RS12910	0.21	-0.1
2,774,027	-		RR42_RS12910	0.24	-1.4
2,774,027	-		RR42_RS12910	0.24	-1.3
2,774,167	+		RR42_RS12910	0.34	+0.7
2,774,363	+		RR42_RS12910	0.47	-0.2
2,774,364	-		RR42_RS12910	0.47	-0.5
2,774,364	-		RR42_RS12910	0.47	-0.7
2,774,364	-		RR42_RS12910	0.47	-0.2
2,774,365	+		RR42_RS12910	0.47	-0.5
2,774,365	+		RR42_RS12910	0.47	-0.1
2,774,366	-		RR42_RS12910	0.47	-0.3
2,774,413	+		RR42_RS12910	0.51	-0.1
2,774,414	-		RR42_RS12910	0.51	-0.3
2,774,447	-		RR42_RS12910	0.53	-0.4
2,774,449	+		RR42_RS12910	0.53	-1.6
2,774,450	-		RR42_RS12910	0.53	+0.2
2,774,450	-		RR42_RS12910	0.53	-0.4
2,774,618	-		RR42_RS12910	0.65	-1.0
2,774,618	-		RR42_RS12910	0.65	+0.6
2,774,644	+		RR42_RS12910	0.67	-0.4
2,774,645	-		RR42_RS12910	0.67	-0.6
2,774,648	+		RR42_RS12910	0.67	+0.7
2,774,649	-		RR42_RS12910	0.67	-0.9
2,774,695	+		RR42_RS12910	0.70	-0.0
2,774,749	+		RR42_RS12910	0.74	-0.7
2,774,881	+		RR42_RS12910	0.83	-1.8
2,775,024	+				+0.3
2,775,086	-				-1.1
2,775,109	+				-1.9
2,775,110	-				-0.8
2,775,451	-				-1.3
2,775,603	-				+0.5
2,775,845	-		RR42_RS12920	0.15	-0.6